| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1660 |
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| Symbol | |
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| ID | 5610416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1987629 |
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| End bp | 1988495 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932530 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473399 |
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| Protein GI | 157374799 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.515318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT TTTTTATCTC TATAGCGCTA TTACTCCCAT GTGTGTTGAG TAGCAGTAGT
TTTGCTCAAA GCAACTTCCC TCTCTTAAAA GGGCCCTATA TGGGGCAAAA AACTCCTGGT
TTGGTAGCCC AGCCTTTTGC ACCTGGTGTG ATCTCCAAGG ACGGATGGGA AATCGAAGGC
GTCTTTGCAC CCGGCATGAA AGAGTTCTAC TACACAACCA GAGCGGCCGA TGGCAAAAAA
ATAATCGTGA TCGGATTTCG TCAACAAGAC GACGTCTGGA AGAAATACTT ACAGTTTCCC
CGTAATGGCG AAGTGACCTT CTCCCCAGAC GGCACACGCA TGTATATGGC TGATGGCTAT
AAAGATCGGC TCAACGATGG TTGGAGCGAG CGTAATACCC TTGGACCCAT GTTTGATAGG
GAAGATCGGG GCATTATGCG CCTATCGGCT TCCGCCAAAG AAACCTATGT GCATGATGAT
TATAAAGGTG GCGATGTGCT GCGAATATCA ACACTCGAAA ATGGAAAGCG CACAGAGCCA
CAACTGATGA GTGACAATTT CAATACCGGA GAGTGGACGG CGCACCCTTT CATAGCACCA
GATGAAAGTT ACCTTATTTG GGACAGCGAG CGACCTGAAG GGTTTGGGGG TTCTGATCTC
TATATCAGCT TCAGACAAGA TGATGCTACT TGGGGCCCTG CTATTAACAT GGGGGAAAGC
GTCAACTCTG ACAAATGGGA TGCTTACGCA AGCGTAACGC CAGACGGTAA ATACATCCTA
TTTAACAGAG GGATTGATGA TAATGGCAAT ATTGATATCT ATTGGGTAGA TGCTCAAATC
ATCGAAACTC TTAGACCTAA GAGCTAG
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| Protein sequence | MKRFFISIAL LLPCVLSSSS FAQSNFPLLK GPYMGQKTPG LVAQPFAPGV ISKDGWEIEG
VFAPGMKEFY YTTRAADGKK IIVIGFRQQD DVWKKYLQFP RNGEVTFSPD GTRMYMADGY
KDRLNDGWSE RNTLGPMFDR EDRGIMRLSA SAKETYVHDD YKGGDVLRIS TLENGKRTEP
QLMSDNFNTG EWTAHPFIAP DESYLIWDSE RPEGFGGSDL YISFRQDDAT WGPAINMGES
VNSDKWDAYA SVTPDGKYIL FNRGIDDNGN IDIYWVDAQI IETLRPKS
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