| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1655 |
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| Symbol | |
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| ID | 5610953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1981820 |
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| End bp | 1982308 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932525 |
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| Product | colicin V production protein |
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| Protein accession | YP_001473394 |
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| Protein GI | 157374794 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00513231 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTGGA TTGATTACGC CATAATCGCC GTTATCGGAG TCTCGACTTT AATTAGTCTG
CTTCGCGGCT TTGCAAAAGA AGCCATGTCC CTCGTGGTTT GGTTTGCTGC TTTTTTCGTT
GCGAGTCAGT TTTATCAGGA CCTCGCTGTA TACCTAACCC AAATGCAAGA TGAGATGCTC
CGCAATGGTG TCGCTATAGC GATACTTTTT GTCGCGACAC TGATCCTTGG TGCCTTGGTG
AATTATCTTC TCGGTCAGCT CGTCGATAAA ACCGGTTTAT CGGGAACTGA TAGAGTCCTC
GGACTCTGCT TTGGTGCCTT AAGGGGCGCC TTAATTGTGA GTGCTTTACT CTTTTTTATG
GATGCTTTTA CTGGAGCACC CAATACAGAT TGGTGGCAGA GTTCGCAACT CGTGCCCGAA
TTCGGCGTCG TTATTCAGTG GTTTTTTGAC TACATAGAAA ACACGTCTAG CTTTGTACCC
AAAATATAA
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| Protein sequence | MVWIDYAIIA VIGVSTLISL LRGFAKEAMS LVVWFAAFFV ASQFYQDLAV YLTQMQDEML
RNGVAIAILF VATLILGALV NYLLGQLVDK TGLSGTDRVL GLCFGALRGA LIVSALLFFM
DAFTGAPNTD WWQSSQLVPE FGVVIQWFFD YIENTSSFVP KI
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