| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1638 |
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| Symbol | |
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| ID | 5611036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1958129 |
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| End bp | 1959223 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932508 |
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| Product | chorismate synthase |
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| Protein accession | YP_001473377 |
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| Protein GI | 157374777 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAA ACAGTATTGG TCAGAATTTT GTGGTTACAA CATTTGGTGA GAGCCACGGA
AAAGCATTAG GGTGCATAAT TGATGGATGC CCTCCCGGAC TCGAGCTCAA TGAGGCCGAT
ATGCAGCGCG ATCTTGACCG TAGACGTCCA GGTACTTCCC GCTATACGAC GGCAAGGCGT
GAACCTGACG AAGTGCGCGT ACTTTCGGGG ATCTTCGAAG GGAAAACCAC CGGCACCTCT
ATCGGCTTGA TGATCGAAAA TACCGATCAG CGCAGCAAAG ATTATTCGAA TATTAAAGAC
CTTTTCCGTC CCGGACACGC CGATTATACC TACCAGCAAA AGTATGGCCT GCGCGATTAC
CGCGGAGGCG GACGTTCATC GGCTCGTGAA ACCGCGATGC GTGTGGCTGC AGGCGCAGTG
GCCAAAAAAT ACCTTAAACA AGTTCATGGT ATTGAAATTA ACGGCTACCT GTCTCAACTC
GGCCCGATAA AGGCCGACAC CGTGGATTTT TCTCAGATTG AACAAAATGC TTTTTTCTTT
CCTGATGAGT CTAAGCTCGA TGAACTTGAT GAATATATGC GTAAGCTGAT CAAAAGTGGC
GACTCCATCG GTGCTAAAGT CAGCGTGGTC GCAACGGGTG TTCCCGTTGG GCTAGGAGAG
CCGGTATTTG ACAGGCTCGA CGCCGAAATC GCCCATGCCC TGATGGGGAT TAATGCCGTA
AAGGGCGTCG AGATTGGTGA TGGTTTCGGG GTGGTCAATC AGAAGGGGTC GGAACACAGA
GATTTGATGT CACCCGAAGG TTTTGCCTCT AATCATGCTG GCGGCATTTT AGGTGGAATA
TCTTCCGGTC AGCCCATTGT TGCCCACATA GCGATGAAGC CGACCTCAAG TATCAGTATT
CCGGGTGAAA GTATGACGGC GCAAGGCGAT GTCGCCGAAG TCGTCACTAA AGGCCGCCAC
GATCCCTGCG TCGGTATACG CGCGGTACCG ATCGCCGAGG CCATGCTGGC GATTGTATTA
ATGGATCACC TGTTACGCCA CAGAGCGCAG AATATGGATG TAAATAGTCA GACACCAGAG
ATAGGGATGC GTTAA
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| Protein sequence | MSGNSIGQNF VVTTFGESHG KALGCIIDGC PPGLELNEAD MQRDLDRRRP GTSRYTTARR
EPDEVRVLSG IFEGKTTGTS IGLMIENTDQ RSKDYSNIKD LFRPGHADYT YQQKYGLRDY
RGGGRSSARE TAMRVAAGAV AKKYLKQVHG IEINGYLSQL GPIKADTVDF SQIEQNAFFF
PDESKLDELD EYMRKLIKSG DSIGAKVSVV ATGVPVGLGE PVFDRLDAEI AHALMGINAV
KGVEIGDGFG VVNQKGSEHR DLMSPEGFAS NHAGGILGGI SSGQPIVAHI AMKPTSSISI
PGESMTAQGD VAEVVTKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRHRAQ NMDVNSQTPE
IGMR
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