| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1636 |
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| Symbol | |
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| ID | 5611012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1956330 |
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| End bp | 1956860 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932506 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473375 |
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| Protein GI | 157374775 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.788761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AAAATAACAC CGAAGATCAA GATCTGTTTT CGACGCTAAC TGAAGGGATC
AAACCCTTGA AGCAGGATAA GCGTCATTTT CGAGTACATT CAAAAGATAA AAAGCAGATA
GAAGAGAAAG AGCAACAGCT ACACGCTGAC AGTTATTTTT CAGATACTTA TCAGCCCCAC
CTTCCCGATG AAGGCGCCAT GCGCTGGAAT CGAGATGATG TCGACAGCTT TGAGGTAAAA
CGATTACGTC GGGGCGATTA CCAGCCGGAC TTGTTACTCG ACCTCCATGG TATGCGGCAA
TCTGAAGCTA AACTTGAACT GGCTGCATTG ATCCAGGCAT GCATAAGGCA ACAATCCCAT
TGCTGCTGCG TGATGCACGG ACATGGTACC GGCATCCTGA AGCAGAATAT TCCCATGTGG
TTAGCCCAGC ATCCTCATGT GATGGCTTTT CATAAAGCCC CTAAAGAATG GGGTGGCGAT
GCGGCTCTTT TGGTACTAAT CGATATCGGC GATGTGCCTT ACAGAAGGTA G
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| Protein sequence | MKKKNNTEDQ DLFSTLTEGI KPLKQDKRHF RVHSKDKKQI EEKEQQLHAD SYFSDTYQPH
LPDEGAMRWN RDDVDSFEVK RLRRGDYQPD LLLDLHGMRQ SEAKLELAAL IQACIRQQSH
CCCVMHGHGT GILKQNIPMW LAQHPHVMAF HKAPKEWGGD AALLVLIDIG DVPYRR
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