| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1585 |
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| Symbol | |
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| ID | 5612126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1890409 |
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| End bp | 1891188 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640932455 |
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| Product | permease |
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| Protein accession | YP_001473324 |
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| Protein GI | 157374724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG AGCTTTCCTT TGAACTCATC ACATTACTGT TCGCCGTCGC GGTATTAGCG
GGGTTTATTG ACTCCATTGC CGGCGGTGGT GGCTTAATTA CTATTCCGGC TCTGATGTGG
GCAGGTCTGC CTCCGACGGC GGCATTAGCG ACCAATAAGC TTCAAGCTTG TGGGGGCAGC
TTCTTTGCCA GCCTCTATTT TGTCCGCAAG GGGATGGTTA AGCTTGGGGA GATGAAGCTC
GCGATACTCT GTGCCTTTAT CGGCTCTGCT TTAGGTACTA TTGCTGTACA GCAGATAGAT
ACCGCGTTTC TTGAGGTCCT GCTGCCATTT TTGATGCTGG CGATAGGGGC CTACTTTCTC
TTCTCGAAGA AGATCTGTGA GGAGGACAGA CATAGGGTCA TGACGCCAAC GCTGTTCGCC
TTCACCGCCG CCTTGGCTGT GGGCTTATAC GATGGTTTCT TCGGTCCGGG CACCGGCAGC
TTCTTCGCCC TGGCGTTCGT CTCCTTAGCG GGCTTCGGGC TGGCCAAGGC CACCGCCCAT
GCTAAGGTGC TTAACTTCTC GACCAATATT GCATCGCTTA TCTTCTTCGC AATAGGCGGC
AAGGTGTTTT GGATGCTTGG CGGCATCATG CTTATCGGCC AGGCACTGGG TGCCACTCTG
GGCTCGCGTT TGGTACTCAC CAAGGGGACG AAAATCATCA AGCCGCTGGT GGTGATCATG
TCCGTTGCAA TGAGTGTGAA ACTGCTGTCA GATCAGTATG ACCTGTTTTC CTGGCTATAG
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| Protein sequence | MALELSFELI TLLFAVAVLA GFIDSIAGGG GLITIPALMW AGLPPTAALA TNKLQACGGS
FFASLYFVRK GMVKLGEMKL AILCAFIGSA LGTIAVQQID TAFLEVLLPF LMLAIGAYFL
FSKKICEEDR HRVMTPTLFA FTAALAVGLY DGFFGPGTGS FFALAFVSLA GFGLAKATAH
AKVLNFSTNI ASLIFFAIGG KVFWMLGGIM LIGQALGATL GSRLVLTKGT KIIKPLVVIM
SVAMSVKLLS DQYDLFSWL
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