| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1573 |
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| Symbol | |
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| ID | 5612377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1879892 |
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| End bp | 1880416 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932443 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001473312 |
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| Protein GI | 157374712 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.119512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00360168 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTATTCC TGATGGATAT CTGGGATTCC GTCAGGGGCT TCATGGCCGC CGGGGGCGAC
GTCCTCTGGC TAGTGGCTGG TGTATTGTTT GTCATGTGGG TATTGATGCT TGAGCGCTAC
TGGTATCTCA ATTGGGTATC ACCAAAAGAG CACAAAGCAA TCATTAGCGC ATGGGAAGCG
AGAGAGGATT CAACCTCTTG GTATGCACAC CGCATCCGTG AAGCTTGGGT ATCCCAAGCG
AAGCAAGATT TAACGGCACG TATGCTGCTT ATCAAAACCT TAGTTGCAAT CTGTCCTATG
ATAGGTCTGC TAGGTACCGT AACCGGAATG ATATCAGTAT TCGATGTGAT GGCAGTTCAT
GGCACGAGTA ATGCTCGTAT GATGGCAGCT GGTATTTCAA TGGCAACCAT GCCGACAATG
GCGGGAATGG TTGCTGCGTT ATCGGGAGTA TTCTTTAGTA CTCGTCTTGA CGCAAAAATG
AAAATCAGTT TGGCAAAGCT AAAAGACAGT CTGCCGCACC ACTAG
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| Protein sequence | MLFLMDIWDS VRGFMAAGGD VLWLVAGVLF VMWVLMLERY WYLNWVSPKE HKAIISAWEA
REDSTSWYAH RIREAWVSQA KQDLTARMLL IKTLVAICPM IGLLGTVTGM ISVFDVMAVH
GTSNARMMAA GISMATMPTM AGMVAALSGV FFSTRLDAKM KISLAKLKDS LPHH
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