| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1458 |
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| Symbol | |
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| ID | 5610891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1729740 |
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| End bp | 1730909 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640932324 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001473197 |
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| Protein GI | 157374597 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.499178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAC TCTACTCATC TCTCAATTTT GGCCTTGGCG AAGACGTCGA TATGCTGCGT
GATGCAGTAC AGCAGTTTGC CGCCAATGAA ATCGCACCAT TAGCCGCTAA GACCGATCTC
GATAACGCCT TTCCTAACGA GCTTTGGCCG GTTCTGGGTG ATATGGGGCT ACTCGGTGTC
ACCGTTTCTG AGGAGTATGG TGGTGCCGAT ATGGGCTACC TCGCCCACGT CGTTGCCATG
GAGGAGATCT CACGAGCATC TGCCTCTATC GGTTTGAGTT ATGGGGCCCA CTCTAACCTT
TGCGTCAACC AGATCAATCG CAACGGTAAT GCGGCTCAGA AAGCCAAGTA CCTGCCAAAG
TTAATAACAG GTGAGCACAT TGGCGCCCTG GCGATGAGCG AACCCAATGC AGGTTCAGAT
GTGGTTTCGA TGAAGCTGCA CGCCCGCAAG GAGGGTGATC GCTATATCCT TAATGGCAAC
AAGATGTGGA TCACTAACGG CCCCGATGCT CATACCTATG TTATCTACGC AAAAACGGAT
CTCGATAAAG GCGCTCATGG TATTACCGCT TTTATCGTCG AACGGGACAG CAAAGGCTTC
AGCACGGCAC AGAAGCTGGA CAAGCTTGGC ATGCGCGGCT CTAACACCTG CGAACTCGTC
TTCGAAGATT GTGAGGTCCC CGAAGAGAAT ATCCTTGGCG GACTCAACAA CGGCGTTAAG
GTATTAATGA GTGGTCTGGA CTACGAGCGC GTAGTGCTAT CCGGCGGCCC ATTAGGCATC
ATGACCGCAT GTATGGATAT CGTTATTCCC TATATTCACG AGCGTGAGCA GTTCGGTAAG
TCCATTGGTC AATTTCAACT GGTCCAGGGC AAGCTAGCCG ATATGTACAC AGGCATGAAC
GCCGCAAAAT CTTATATCTA CAACGTGGCA AAATCCTGCG ATCGCGGTGA GACAACACGT
AAAGACGCCG CCGGCGCTAT TTTATATTCG GCCGAGCTCG CCACTAAGAT GGCACTCGAC
GCCATTCAAC TTCTGGGCGG AAACGGTTAC GTCAACGAAT ACGCGACAGG CCGATTGCTG
CGCGACGCCA AACTCTATGA GATTGGTGCC GGCACATCGG AAATTCGTCG CATGTTGATA
GGCCGTGAAC TCTTCAACGA GTCTAAATAG
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| Protein sequence | MTQLYSSLNF GLGEDVDMLR DAVQQFAANE IAPLAAKTDL DNAFPNELWP VLGDMGLLGV
TVSEEYGGAD MGYLAHVVAM EEISRASASI GLSYGAHSNL CVNQINRNGN AAQKAKYLPK
LITGEHIGAL AMSEPNAGSD VVSMKLHARK EGDRYILNGN KMWITNGPDA HTYVIYAKTD
LDKGAHGITA FIVERDSKGF STAQKLDKLG MRGSNTCELV FEDCEVPEEN ILGGLNNGVK
VLMSGLDYER VVLSGGPLGI MTACMDIVIP YIHEREQFGK SIGQFQLVQG KLADMYTGMN
AAKSYIYNVA KSCDRGETTR KDAAGAILYS AELATKMALD AIQLLGGNGY VNEYATGRLL
RDAKLYEIGA GTSEIRRMLI GRELFNESK
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