Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1409 |
Symbol | |
ID | 5613709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1670980 |
End bp | 1671312 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640932275 |
Product | hypothetical protein |
Protein accession | YP_001473148 |
Protein GI | 157374548 |
COG category | [S] Function unknown |
COG ID | [COG2914] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATAG ATCAAGAAAA TTTTGAGGTA GAGGTTATCT ATGCCTTGCC AACACAACAA AAACGTATTC AGATCAAGGT AGCACCGGGT ACGACCTGTA TCGAAGCGGT TAAACAGAGC GAAATCGATA TTTTCTTTCC CGAGATAGAT CTCGAAAACG TTAAGCTAGG CATTTTCAGC CGTTTAGTGA AACATCACGA GGTGTTAGTG CCGGGACAAA GGGTTGAGAT ATATCGTCCA CTTATTGCCG ATCCTAAAGA TGTGCGCCGT AAAAGAGCCG AAAAGGCTAA AGATGAGGGA CGGATAAATA AGAAGACTGG CGGAAAGGTG TAA
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Protein sequence | MNIDQENFEV EVIYALPTQQ KRIQIKVAPG TTCIEAVKQS EIDIFFPEID LENVKLGIFS RLVKHHEVLV PGQRVEIYRP LIADPKDVRR KRAEKAKDEG RINKKTGGKV
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