| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1405 |
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| Symbol | |
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| ID | 5612620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1667412 |
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| End bp | 1668029 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932270 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001473144 |
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| Protein GI | 157374544 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGATA AAATTCAATA CGGCTTTTTT GTCGACACCA CCAAGTGTAC CGGCTGCAAA
ACCTGCCAGG TGGCATGTAA AGACCGCAGT GATCTGTCTT TGGGAGTAAA GTGGCGCCGC
GTGTATGAAT ATGGTGGTGG CAGCTGGACC GAAAATGAGG ATGGTACCTT TAATAACAAT
GTGTTTGCTC ACTACACCTC AATCTCGTGT AACCACTGCT CTCATCCTGT GTGCGTCAAA
GCATGCCCTA CCGGTGCTTG CCATAAGCGC AAGAGCGATG GGCTGGTGCA TATCGAAGCC
AGTCTCTGCG TAGGCTGTCA AAGCTGTTCA CGTGCTTGTC CCTATGATGC ACCTCAATTC
GACAGCGAGC GTGGCGTGAT GACCAAATGT GATGGTTGCT ACGACCGTCT GGAGCAAGGG
TTAAACCCTA CCTGTGTCGA TTCGTGCCCC CTGCGGGCTC TGGAGTTTGG GCCAATCGAT
GAGCTGCGCA ACAAGCATGG TGATAATGCC GATATTCAGC CTCTTCCGAG TTCTGACATC
ACCTCGCCAA ACCTGATCAT TAAGGTTAAT CGCAATGCTC AGCCGGGCGG AGAGATACTG
AATGAGTTTG AGGTTTAA
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| Protein sequence | MTDKIQYGFF VDTTKCTGCK TCQVACKDRS DLSLGVKWRR VYEYGGGSWT ENEDGTFNNN
VFAHYTSISC NHCSHPVCVK ACPTGACHKR KSDGLVHIEA SLCVGCQSCS RACPYDAPQF
DSERGVMTKC DGCYDRLEQG LNPTCVDSCP LRALEFGPID ELRNKHGDNA DIQPLPSSDI
TSPNLIIKVN RNAQPGGEIL NEFEV
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