| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1399 |
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| Symbol | |
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| ID | 5613297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1658336 |
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| End bp | 1659649 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640932264 |
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| Product | formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein |
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| Protein accession | YP_001473138 |
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| Protein GI | 157374538 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGCA TAGTGAGTGC CTTTCTGCTT GTATCGGCAC TGGTGTTGCC GCTGTTGCTG
GCGTTTCCGG CATTGCATCG TCGTCTGCCC TGGCCTGTAC ATATTGCCCT GTTGCCAGCG
GTTGCTCTGG TGTTTATCCC TGTAGATTAT TGTATTGAAC TGCCTTGGTT TCAGTTGGGA
TCAGGGCTGG GTCTCGATGC GGGGTCTCGC TGGTGGTTGG CGATATCAGT AGTGGTGTGG
GGCGTTGCGG CAACCTCTTT GCACGCTCCG GATGGGCGTG ATGTTTATCA TCCTCAGACA
AGCTTGTTTC TGTTATCTTT GGCGGGGCAG CTGGGCGCGA TTCTGGCGAC GGATTTGGTC
TGTTTCTTCG CGTTCACGAC CCTGATGGGG TATGCGTGTA TTGGCCTGTT GCTTGCCGAT
GCAGATGAGT CGACTCGTCG CGCCGGACGG GTATACCTGG TGTTGCTGAT CTTCGCGGAT
ATTATCCTGT TTGAGGCTAT GGTGATGGCC GAAGCGATAA CTGAAGATCT GGGTTTCGCA
ATCCTGGCTC ACGCAGTGTC GCTAACCAAA TCCTCAGATC TCTATCTGTC GATAGTGATT
GTTGGCTTCG CCCTCAAGGT GGGTTTATGG CCGTTACACA TATGGCTGCC ATTGGCCTAT
GCCTCTGCTC GCCCCGCAAC GGCACTGCTG TTGTGGGTTG GTCCCGTCGC AACCGGCTTG
CTTGGCATCG TACGCTGGCT GCCTCTGGGT GAGATGGCTG CGCCGATGCC GGGGATCTTG
CTCCAGGCCG TTGGCGCAGT CACAATCCTT TATGTCATAC TTTTTGGTTT TATGCGGGCA
CAACGCAAAC AGCTACCAGC CTATGTTGCC ATCATAGTGA CGGGAAGCTT CGTTATGGGC
TTGGGGGCTG GTTTGAGCGA TCCTGCCTTA TGGAACAGGT ATGGAGATTT GGCCCCTATC
TTCATTTTTA CAGTTGGATT GGGATTGGCG ATTATGATCG TCAGTTTCGA ATGCTATAAG
GCGAAGGGCA AGGTGTCCGG GTCGAAGAGG GCTGACCGGA CAGCACTGGA GATGGAGCAC
TGGTTTAAAG CTTTCATTCG CTGGGGGCGG CGGACAGGAA CCGATACTTT ACCGAAATTC
CGCGCTTCAT GGCTTGCCAG ATGGGATGAG CTCTGGCAAA AACGTGTATG GCAAAGAGCG
TTCGACGCCG GTGAATACTT TTTGCAGCGT TGGTCAATTG CGGTCACTCT GTTTTTGCTG
TTAGTTATCG TGACTGTGGT ACTTTTGCTG CTGGATGCCA GGTCGGTTCT GTAG
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| Protein sequence | MNGIVSAFLL VSALVLPLLL AFPALHRRLP WPVHIALLPA VALVFIPVDY CIELPWFQLG
SGLGLDAGSR WWLAISVVVW GVAATSLHAP DGRDVYHPQT SLFLLSLAGQ LGAILATDLV
CFFAFTTLMG YACIGLLLAD ADESTRRAGR VYLVLLIFAD IILFEAMVMA EAITEDLGFA
ILAHAVSLTK SSDLYLSIVI VGFALKVGLW PLHIWLPLAY ASARPATALL LWVGPVATGL
LGIVRWLPLG EMAAPMPGIL LQAVGAVTIL YVILFGFMRA QRKQLPAYVA IIVTGSFVMG
LGAGLSDPAL WNRYGDLAPI FIFTVGLGLA IMIVSFECYK AKGKVSGSKR ADRTALEMEH
WFKAFIRWGR RTGTDTLPKF RASWLARWDE LWQKRVWQRA FDAGEYFLQR WSIAVTLFLL
LVIVTVVLLL LDARSVL
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