| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1377 |
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| Symbol | |
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| ID | 5612698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1636884 |
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| End bp | 1637909 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932242 |
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| Product | esterase/lipase-like protein |
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| Protein accession | YP_001473116 |
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| Protein GI | 157374516 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0657] Esterase/lipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA AAACATGGGT GCTTTCCTTA AGCTTACTGA GCGCTGCGAC AATGGCCAAC
GACTTCTATG TTCCCTCGAC AATATCAATC GAAGGACAAG AGTTTTTAAC TGAAAATTTT
TCCCACGAAT TACGAAACGC CTCTGTCATT CCAGAGGGGA TGGACACGAA AGGATGGAAA
CAGTTACAGG TGCTTTCTGA TGAACAGGTT CAGCCCCTCA ATGATGCCGC AATGGCTATC
TACAAACCCA TCATTAACGA AACCAGCATC GCAGGCGTAC CGGTTGTCGA TATCAAACCC
CAGGGCTGGA AAGATAACGG TAAGGTTTTA GTCTACACAC ACGGTGGTGC GTATGTGGCA
TATACGGCAA AAAGCAGTTT AGCCAGCAGC GTCCCTGTGG CGGCAGATAC CGGTCTTCGT
GTGATATCTG TAGATTATAC TCTGGCGCCT CATGCCAAAT ATGACACCAT CACAGATCAG
GTTATCACCG TTATCCAAGG CTTAACCAAA CAAGGTTACA AGATGTCAGA TATCGCCATC
TATGGGGATT CTGCAGGTGG AGGCTTAGCG GCAGGCTCTG TACTTAAAAT GCGTGATTTA
GGCATGGAGT TGCCCGCCGC AGTTGTGCTT TGGTCTCCCT GGTCAGACAT TACAGATACC
GGTGACAGCT ATCACACGCT AAAAGATGCC GATCCTCTTT ATCTTTACGA CTTACTACTC
AGGCCGTCTG CAGAGGCCTA CGCCGCTAAG AAAGATCAAA AGCATCCCTA TGTATCTCCG
GTATATGGTG ACTACAGCAA ACCTTTTCCA TCGACCTTGA TTCAGGCCGG AACCAAGGAG
CTCTTCTTGA GCAACGCGGT AAGGTTGTAT CAAGCGATAG ACAGCAATGG TGGCGAGGCT
AAGCTCGATA TTTATGAGGG AATGTGGCAT GTATTTCAGG CCTTTTCTTT TAATATTCCA
GAAGCAAAAC TTGCCAGGAA GAAGATGGCG ACCTTCTTAG ATGAAAAGCT GGATACTCAA
GGCTAG
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| Protein sequence | MKIKTWVLSL SLLSAATMAN DFYVPSTISI EGQEFLTENF SHELRNASVI PEGMDTKGWK
QLQVLSDEQV QPLNDAAMAI YKPIINETSI AGVPVVDIKP QGWKDNGKVL VYTHGGAYVA
YTAKSSLASS VPVAADTGLR VISVDYTLAP HAKYDTITDQ VITVIQGLTK QGYKMSDIAI
YGDSAGGGLA AGSVLKMRDL GMELPAAVVL WSPWSDITDT GDSYHTLKDA DPLYLYDLLL
RPSAEAYAAK KDQKHPYVSP VYGDYSKPFP STLIQAGTKE LFLSNAVRLY QAIDSNGGEA
KLDIYEGMWH VFQAFSFNIP EAKLARKKMA TFLDEKLDTQ G
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