| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1370 |
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| Symbol | |
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| ID | 5612139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1625251 |
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| End bp | 1626531 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932235 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473109 |
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| Protein GI | 157374509 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.550304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCA TTGCATCCAT ACTATTATTG GCACTTCCCT TGGCTTTGGC TCATCAAGCA
CAAGCGGTGG AATTCAAGCC ACTCGATAAC GCATTTGTCC AGCAATCGGC TGCTTTTGGG
GTCACTCAGG ATAACTGGGA CCATGGAGCC CATGCCGGGG TAACATTTCC TAATGCGTAT
CGGTTTACCC CCCATATGGA GATCTCACTG CCTGTCGATG TTAACCCTCG AGAATGGCCA
GAGCGCCCTC AAGCGCTGTT GCAGCTGACT GCTGCAGATC TCGATGGTGA GCACAGCTTA
GAAGTGCTCC TCAGAGACCG ATTGAAAAAT CACTCTATGG TGGTGCTTAA CAAAGGGAGC
TTAGTGCATC AGCACTTCTG GAATGGTTAT GGTGCCGGGC AGACACATCT GCAGATGTCA
GTGACTAAGT CTTTTACATC CCTCCTGACC TCAATCGCCG TAGCGCAGGG GAAGCTGGAT
ATGGACAGAG CCATTATTCA GTATCTTCCT GAGCTGAAAG GCACAGGCTT TGAGGATGCA
ACCGTGCAGG AGGTTGCCGA CATGCGTTCA GGCATAGGTG TCACCTTCAG CGAAGGCAAG
CTGTGGGACG ATCGTATGAC AGAAGCGCAA GATTGGAACG GCGACAGTAA ATACCCTGAT
ATGCGCGGTG TGATGGATTA TGCCAATACT CTGGATAACC ATAGGCCAAT AGGCAAGGTT
TATGACTATC TGGATGTGAA TACCGAGCTG TTAGGTAAAG TCGTCGAGAA GGTGCAGGGC
CAGCCGTTAG CTGAACTACT TGAGTCGCAG ATCTGGGGCA AGATAGGTGC ACAGCAGCCA
GCCAAGTGGA TGAGTAATCG TAATGGCGAA GTTGTGGCGT CCGGAGGATT AAATATGACA
ACCCGGGATC TCGCCAAGGT GGGTGAAGTT ATCGCCAACA AAGGGGTGAG TCAACAGGGT
GAACGAGTCA TTCCTGCTGA GTTTATCGAA GCGCTCTTTC AAGGTGATGA TAAAGTTCGT
TTTGCCTGGC AGCAGGGCAA GGAGTCGGCG CTTGCGACAG GTTGGTATAA GGATCAATTT
AGAGTACTCG ATATTAAAGG ACATAAGTTT ATCGCCATGG TCGGAATTCA TGGTCAGATC
TTGGTGATCG AGCCTAAAAG CCAAACGGTT ATTGCGATGA ACTCAGGTTT CGGCGAAATG
GAACCACCAC GGATGGCCAT CTTAATTTTT CAGCAGATTA TTCCAGCAAT TTTGGATAAG
CTGGCACAGG ATAAAGCATA G
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| Protein sequence | MKTIASILLL ALPLALAHQA QAVEFKPLDN AFVQQSAAFG VTQDNWDHGA HAGVTFPNAY
RFTPHMEISL PVDVNPREWP ERPQALLQLT AADLDGEHSL EVLLRDRLKN HSMVVLNKGS
LVHQHFWNGY GAGQTHLQMS VTKSFTSLLT SIAVAQGKLD MDRAIIQYLP ELKGTGFEDA
TVQEVADMRS GIGVTFSEGK LWDDRMTEAQ DWNGDSKYPD MRGVMDYANT LDNHRPIGKV
YDYLDVNTEL LGKVVEKVQG QPLAELLESQ IWGKIGAQQP AKWMSNRNGE VVASGGLNMT
TRDLAKVGEV IANKGVSQQG ERVIPAEFIE ALFQGDDKVR FAWQQGKESA LATGWYKDQF
RVLDIKGHKF IAMVGIHGQI LVIEPKSQTV IAMNSGFGEM EPPRMAILIF QQIIPAILDK
LAQDKA
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