| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1352 |
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| Symbol | |
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| ID | 5611395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1607482 |
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| End bp | 1608396 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932217 |
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| Product | indigoidine synthase A family protein |
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| Protein accession | YP_001473091 |
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| Protein GI | 157374491 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2313] Uncharacterized enzyme involved in pigment biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.866108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGAGC AGTACCTAGA TATTAATCCA GAAGTCGCCG CGGCAATTGC AGCAGGAAAG
CCAGTTGTTG CACTGGAATC TACGATTATT TCACACGGAA TGCCTTATCC GCAAAACGTG
GAAACGGCCC TGAAGGTTGA GCAGATTATT CGTGATAATG GCGCGATCCC TGCGACGATA
GCCATCTTGA AGGGACGATT GAAAGTGGGC ATGACTCATG AAGAGATCGA ATATTTAGGT
AAGGCAGGTT TAGATGTCAT TAAGACCAGT CGCCGCGATA TCCCCTTTAT TGTCGCTAAG
CAGGTAGATG GTGCGACTAC AGTGGCCTCG ACCATGATTT TGGCGCAGAT GGCGGGTATC
AAGGTATTTG CTACAGGCGG TATCGGTGGT GTTCACCGTG GTGCACAACA GACATTTGAT
ATCTCGGCCG ATCTTCAAGA GTTAGCTAAT ACCGATGTGG CGGTTATCTG TGCAGGTGCT
AAATCTATTT TGGATATCGG CCTGACTCTG GAGTATCTGG AGACTCAGGG CGTGCCGGTT
ATCGGTCATC AAACTGATAC TCTGCCCGCT TTCTATACCC GTGAAAGCGA GTTTGGTGTC
GACTACAGAC TGGATACCGC CGAGCAGATC GCGACGGCGA TGAAAGCCAA GTGGGAGATG
GGATTAAAAG GTGGCGTTGT CGTTGCAAAC CCAATACCGG AAGAGTATCA GCTTGATCGC
GCCATGATCG ATGAGGTGAT CATCAATGCC GTTGCCGAGA TGGACAGCAA AGGGATATCG
GGTAAAGAGT CGACACCTTT CTTACTGGCT AAAGTTGCAG AAAAAACAGA AGGCACCAGC
CTGAAAGCCA ACATCGAGCT TGTGTTTAAC AACGCCAAGT TGGCGGCCGG AATTGCTGTT
GAGTATGCGA AGTAA
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| Protein sequence | MLEQYLDINP EVAAAIAAGK PVVALESTII SHGMPYPQNV ETALKVEQII RDNGAIPATI
AILKGRLKVG MTHEEIEYLG KAGLDVIKTS RRDIPFIVAK QVDGATTVAS TMILAQMAGI
KVFATGGIGG VHRGAQQTFD ISADLQELAN TDVAVICAGA KSILDIGLTL EYLETQGVPV
IGHQTDTLPA FYTRESEFGV DYRLDTAEQI ATAMKAKWEM GLKGGVVVAN PIPEEYQLDR
AMIDEVIINA VAEMDSKGIS GKESTPFLLA KVAEKTEGTS LKANIELVFN NAKLAAGIAV
EYAK
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