| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1331 |
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| Symbol | |
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| ID | 5610606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1583676 |
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| End bp | 1584293 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932196 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473070 |
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| Protein GI | 157374470 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4764] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.131922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGT ATTCGGTTTT GATTTCAGCT TGTTTAGCAC TGTTTCTTTC GGGATGTGCC
ACCTCTCCTC CTAAAGAACC CGAAAATTTA TGCTCTATCT ATAAAGAGAA TCGCTCCTGG
TATAAAGCCG CTAAGAATAC GCAAGAGAAG TGGGGGGTGC CGGTGCATGT CCCTCTGGCT
ATGATGTATC AGGAGAGCTC TTTCAAACAT AATGCCGCGC CTCCTATGGA GTATTTTCTT
GGCTTCATAC CGATAGGACG TGCCAGTGAT GCCTATGGTT ATGCCCAGGC AAAGACAATG
ACATGGGATG ATTATGTTAA AGAGACGGGT AACTCCTGGT CCAGTCGCAG CAATTTCGAT
GATGCCATGG ATTTTATGGG TTGGTTTATC TATAAAACCC ATAAAATCAA CGGTGTTTCG
AAATGGGACG CCAGAAATCA GTACCTGAAT TATCATGAAG GCTGGGGCGG TTACAAGCGT
AAAACCTATA ACCAGAAAGC CTGGTTGGTT AAAGTGGCCA AAAAGGTCGA CGATAGGTCG
AAACGCTATG CGGCGCAATA TCGCACTTGT CAGGAAGATC TCGATTCATC CTGGTTATGG
CGCTTGTTCT TTGGTTAG
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| Protein sequence | MKLYSVLISA CLALFLSGCA TSPPKEPENL CSIYKENRSW YKAAKNTQEK WGVPVHVPLA
MMYQESSFKH NAAPPMEYFL GFIPIGRASD AYGYAQAKTM TWDDYVKETG NSWSSRSNFD
DAMDFMGWFI YKTHKINGVS KWDARNQYLN YHEGWGGYKR KTYNQKAWLV KVAKKVDDRS
KRYAAQYRTC QEDLDSSWLW RLFFG
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