| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1327 |
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| Symbol | |
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| ID | 5610570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1577852 |
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| End bp | 1578274 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932192 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473066 |
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| Protein GI | 157374466 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1238] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0199997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAGT TATGGTTGAT GTTTAGTGCA GCTTTTCTTG CTGCCACCTT GTTACCAGGC
GGATCAGAAG TTTTACTCGT CGCTATGTTG AATGATGATA GCTCCATCTG GTTATCTTTA
GTCATAGTGG CAAGTATCGG GAATACTTTA GGAGCGATAA CCAGCTATTA TCTTGGTACC
TTGGGTCGTT TTGCACGCAG TCCGGAGGCG ATGGCTAAGG GGGAGTACCG GCGGTCACTG
GGTATGATCC ATAAGTATGG TTATTGGGCT CTGCTTCTCT CGTGGACGCC GGTCATTGGA
GACCTTTTGT GTTTATTAGC GGGATGGATG AAACTTCCGC TGGTGAAATC GAGTCTGATG
ATATTAATAG GCAAGAGTAT TCGCTACTTG TTGGTGGCAG CACTAGCGCT GCATTGGTTG
TAA
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| Protein sequence | MTELWLMFSA AFLAATLLPG GSEVLLVAML NDDSSIWLSL VIVASIGNTL GAITSYYLGT
LGRFARSPEA MAKGEYRRSL GMIHKYGYWA LLLSWTPVIG DLLCLLAGWM KLPLVKSSLM
ILIGKSIRYL LVAALALHWL
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