| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1300 |
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| Symbol | recA |
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| ID | 5611196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1544274 |
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| End bp | 1545335 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932153 |
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| Product | recombinase A |
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| Protein accession | YP_001473039 |
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| Protein GI | 157374439 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000151962 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATAG ACGCGAACAA AGAGAAAGCA CTTAACGCCG TTTTAGGGCA GATCGAAAAG
CAATTCGGTA AAGGCTCTAT CATGAAGTTG GGCGAGAATC GCTCAATGGA TGTTGAGACT
ATCTCTACCG GTTCACTCTC TCTGGATATA GCCCTGGGCG CCGGCGGTCT TCCGATGGGA
CGTATCGTCG AGATTTACGG CCCTGAATCT TCGGGTAAAA CAACTTTGAC GCTTGAAGTT
ATTGCTGCAG CCCAACGTGA GGGTAAAGTG TGTGCTTTTA TCGATGCGGA ACACGCACTG
GACCCTATCT ACGCTAAAAA GTTAGGTGTG GATATCGATA ACCTACTTTG TTCTCAACCT
GATACCGGTG AGCAAGCATT GGAGATTTGT GATGCCTTAA CTCGCTCAGG CGCCGTCGAT
GTTATCGTTG TCGACTCGGT TGCGGCATTG ACGCCTAAAG CCGAGATTGA AGGTGAGATT
GGTGATTCCC ATATGGGACT TGCGGCTCGT ATGATGAGCC AGGCGATGCG TAAGCTTGCG
GGTAACCTCA AGCAAACCAA CACCATGCTT ATTTTCATTA ACCAGATTCG TATGAAGATT
GGTGTGATGT TCGGTAATCC TGAAACCACC ACGGGTGGTA ATGCGTTGAA GTTTTATGCT
TCGGTTCGTC TCGATATTCG CCGTACCGGT GCAATCAAAG ACCGTGATGA AGTTATTGGT
AACGAGACTC GCGTTAAGGT TGTGAAAAAC AAGATTGCAG CGCCGTTTAA GCAAGCTGAG
TTCCAGATCC TTTACGGTCA GGGTATCAAC AGCACCGGCG AGCTTGTCGA CCTGGGTGTT
GCCCATAAGC TCGTTGAAAA AGCGGGTGCC TGGTACAGCT ATAAAGGGGA TAAGATCGGC
CAAGGTCGTG CTAATGCCGG TAAGTACCTG ATTGAGAACC CTGCCGTTGC ACAAGAAATT
GATGTAGCCC TTCGTGCCTT ACTGCTAACA CCGGCAGCGC CAGTTGCAGA TTCTGCAACC
GGAGATGAAA ACATCGATCT TGAAACGGGT GAAGTGTTTT AA
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| Protein sequence | MKIDANKEKA LNAVLGQIEK QFGKGSIMKL GENRSMDVET ISTGSLSLDI ALGAGGLPMG
RIVEIYGPES SGKTTLTLEV IAAAQREGKV CAFIDAEHAL DPIYAKKLGV DIDNLLCSQP
DTGEQALEIC DALTRSGAVD VIVVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA
GNLKQTNTML IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRTG AIKDRDEVIG
NETRVKVVKN KIAAPFKQAE FQILYGQGIN STGELVDLGV AHKLVEKAGA WYSYKGDKIG
QGRANAGKYL IENPAVAQEI DVALRALLLT PAAPVADSAT GDENIDLETG EVF
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