| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1275 |
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| Symbol | |
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| ID | 5611099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1514529 |
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| End bp | 1515632 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932128 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_001473014 |
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| Protein GI | 157374414 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000002422 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000197621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTTAC ACAGTATAGA AGAGATCATC GAAGATATTC GCCTCGGTAA AATGGTTATC
TTGATGGACG ATGAAGATAG AGAAAACGAA GGTGACTTGA TCATGGCTGC CGACATGGTG
ACGCCTGAAG CCGTTAACTT TATGGCGACC TATGGCCGTG GTTTGATCTG TCAGACCTTA
ACTAAATCAC GTTGTCAGCA GTTGAACTTG CCCTTGATGG TAACGAACAA TAATGCTCAG
TTTTCAACTA ACTTTACCGT CTCTATCGAA GCGGCAGAAG GGGTTACGAC GGGTATTTCT
GCTCAAGATC GAGCCGTTAC TGTGCTTGCG GCTGTAGGTA AAGATGCGAA ACCTACGGAT
ATCGTTCAGC CTGGTCATAT TTTCCCATTG ATGGCGCAAG AGGGCGGAGT GCTTATTCGT
GCCGGCCATA CTGAGGCGGG TTGTGATTTA GCACGTTTGG CAGGCTCTGA ACCTTCGGCG
GTAATCGTTG AAATTCTTAA TGACGATGGC ACTATGGCCC GTCGTCCCGA TCTTGAGATC
TTCGCCGAAA AGCATGGTCT TAAGATGGGT ACCATTGCCG ATTTGATTGA ATATCGAAAT
ACCAAAGAGA CCAGTGTTGT GCGTGAAGCG CAATGTAAGT TACCAACTCG TTTCGGTGAG
TTCGATATGT TGACCTTCAG AGATACCATA GATAATCAGC TGCATTACGT GCTGATTAAG
GGGGAGGTCA AAGAGGATGT GCTGGTACGA GTGCATCTGC AGAACACGTT CAATGACCTG
TTGCATTCAG AACGCGATCA ACAGCGTAGC TGGCCACTCG AAAAGGCAAT GCAACGTATT
GCCGATGATG GTGGTGTATT GGTGTTACTG GGTCATCAAG AACATAGCAG TGACATCCTG
GCGAAAGTAA AAACATTTGA ACTGGAAGAT AGCGGTCAAG CGGTTGCACC TGCTAAATGG
CATGGGACTT CTCGTCAGGT CGGGGTCGGT TCACAGATCC TTGCTAATGT CGGTGTGACA
AAGATGCGTT TATTAAGCTC GCCAAAGCGT TATCATTCAC TTTCCGGGTT CGGTTTAGAA
GTCACAGGCT ATATCGCCGA GTAA
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| Protein sequence | MSLHSIEEII EDIRLGKMVI LMDDEDRENE GDLIMAADMV TPEAVNFMAT YGRGLICQTL
TKSRCQQLNL PLMVTNNNAQ FSTNFTVSIE AAEGVTTGIS AQDRAVTVLA AVGKDAKPTD
IVQPGHIFPL MAQEGGVLIR AGHTEAGCDL ARLAGSEPSA VIVEILNDDG TMARRPDLEI
FAEKHGLKMG TIADLIEYRN TKETSVVREA QCKLPTRFGE FDMLTFRDTI DNQLHYVLIK
GEVKEDVLVR VHLQNTFNDL LHSERDQQRS WPLEKAMQRI ADDGGVLVLL GHQEHSSDIL
AKVKTFELED SGQAVAPAKW HGTSRQVGVG SQILANVGVT KMRLLSSPKR YHSLSGFGLE
VTGYIAE
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