| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1213 |
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| Symbol | |
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| ID | 5611309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1445506 |
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| End bp | 1446633 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932062 |
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| Product | N-acetylglucosamine-6-phosphate deacetylase |
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| Protein accession | YP_001472952 |
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| Protein GI | 157374352 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
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| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0116685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.917529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCAGA CTTTTATTGC ACAGCAAGTA TTCGATGGCG AGACTTTTCA TAGTGAATGC
CCGGTTACTA TTGAGGATGG GCATATTCTG GCATTTGATA CCGTTTCCGG TGCAAAGGAA
GTGAAGCTGG ATGGGATGCT CTCTCCCGGC TTTATCGATG TTCAGGTAAA TGGTGGTGGC
GGGGCGTTAT TAAATGCAGA TACCTCGGTC GAGTGCATCG AGACGATAGG TTCCGCACAC
GCTAGATTCG GCACCACAGG TTTCCTGCCG ACACTCATTA CAGATGACAT CGACGTGATG
CGAAGAGCGG CCGATGCCGT TGCCGCTTCA TTAACTAAAG CTAGTGCCGG TGTATTGGGT
GTGCACTTTG AGGGGCCGCA CCTCTCTATT CCTAAAAAAG GGGTGCACCC TCAATCTCAT
ATTCGTCGCA TATCCGACGC CGAACTCGAA CTCTTTAGTC GCGATGACTT AGGCATTAAG
CTTGTGACTT TGGCACCTGA AAATGTCTCC GTTGAGGTGA TTAAGGCACT CGTTGCAGCC
GATGTTAAGG TCTGCCTTGG TCATTCAAAT GCCGATTATG AAACGGTTGT AGCCGCACTC
GAAGCCGGCG CTACCGGGTT TACTCATCTG TTTAATGCTA TGTCAGCATT TGGCTCCAGA
GAGCCGGGCA TGGTTGGTGC AGCCTTAGAA AGCAGGGATG CCTGGTGTGG CTTAATTGTC
GATGGACACC ATGTTCATTC GGCTGCGGCT AAGGTGGCTA TCTACGGAAA ACCCCAAGGC
AAGGTAATGC TGGTTACCGA TGCCATGCCT CCGGTAGGCC TGAATAGTGA AGCGAGTTTC
GAGCTCTTTG GCACTGAGGT TATACGTCAA GGTGATCGAT TAAATGCGCT TACCGGTGAG
CTTGCCGGTT GTGTACTCGA TATGGCTGGA GCGGTGCGCA ATACCGTCAA TATGTTGGGA
ATAGATTTAG ACGAAGCGAT AAGAATGGGA TCTCTCTATC CGGCGCAATT TTTAAATCTT
GAAAAGCGCC AAGGCCAGCT ATCGGTAGGC AGTCGTGCAG ACTTTAGCTT ACTCAATCAT
CATATCAAAG TTGAACAAAC CTACATTGGT GGAAAGCGTG TATTTTAG
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| Protein sequence | MKQTFIAQQV FDGETFHSEC PVTIEDGHIL AFDTVSGAKE VKLDGMLSPG FIDVQVNGGG
GALLNADTSV ECIETIGSAH ARFGTTGFLP TLITDDIDVM RRAADAVAAS LTKASAGVLG
VHFEGPHLSI PKKGVHPQSH IRRISDAELE LFSRDDLGIK LVTLAPENVS VEVIKALVAA
DVKVCLGHSN ADYETVVAAL EAGATGFTHL FNAMSAFGSR EPGMVGAALE SRDAWCGLIV
DGHHVHSAAA KVAIYGKPQG KVMLVTDAMP PVGLNSEASF ELFGTEVIRQ GDRLNALTGE
LAGCVLDMAG AVRNTVNMLG IDLDEAIRMG SLYPAQFLNL EKRQGQLSVG SRADFSLLNH
HIKVEQTYIG GKRVF
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