| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1209 |
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| Symbol | |
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| ID | 5614016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1438522 |
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| End bp | 1440048 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932058 |
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| Product | tryptophan halogenase |
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| Protein accession | YP_001472948 |
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| Protein GI | 157374348 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.311625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA AGAGAGTTGT AATTGTTGGC GGCGGAACTG CTGGCTGGTT AGCAGCCAAT
CACCTGGGTA AAGCTGCATT AAATAATGAG CTGTTATCGG TAACCTTAAT TGAATCACCC
GACATTCCAA CTATCGGTGT GGGGGAGGGA ACGGTCCCAG CAATAAGGCA GTCTTTGCAA
AGCTTTGGTA TTAGTGAAAC AGAGTTTATT AAACGTTGTG ACGTGACGTT TAAACAGTCG
ATAAAGTTTG CCAACTGGCT TGATAAAGAG GTACATGGTC AACACAACTT CTATCATCAC
CTATTTGATA TGCCAAGCTC CTTAGGGAAG GAGTTAACCC AAGCATGGTT ATCAAAAAAG
GGCAGGACTT ACGCGGAGAC CATTTCACCA CAACATGCTG TTTGTGAGGC TTACAAAGGT
CCTAAAACAA TTAGTGATGC TGAATATAAG GGACATTTGG GTTATGCCTA TCACCTAAAT
GCCGCTAAGT TTGCCAAGCT GTTAGGTGAG AATGCGCAAG AGCGCTTTAA TGTTCAGCAT
ATAAGTGCAA ATGTGCAAGA AGTGATTTTG GGTGAAGATG GGGAGATTAA GTCTCTGGTT
ACCGACAGCG TAGGGACACT CGATTTTGAC TTTTATATTG ACTGTAGTGG CTTCGCTTCC
TTATTAATTG ATAAAGCACT CAAGGTTCCC TTTGTAGATA AAGCAGAGCA GTTGTTCGTC
GATAAAGCGA TAACGGTACA AGTGCCAACA GATCCAGCCA GCGCTATTCC CCCGTTCACT
ATTGCAACTG CACATCAGGC CGGGTGGATC TGGGATATTG CGTTGAGTAA CCGCAGAGGA
GTGGGGTTCG TCTATTCAAG TAAATATATG GATGATGAGA CTGCTGTCTG TAAACTGGAC
CATTATCTCG GTGGCAAGTT GTCGGAGCAT AGCTATCGAA CTATACCTAT GAAGGTGGGT
TATAGAGAGC GTTTCTGGGA GAAAAACTGT GTTGCATTGG GACTCGCTCA AGGCTTTTTA
GAGCCCTTGG AGGCAACCTC AATCCTACTG ACTGATTTCT CCGCAGGATT TTTGGCCAAT
AGATTCCCAA CTTCCGCAGC GCAACTGGAT GGAATGAGGC AACAGTTTAA TCAGGTGATG
GGTTATGCCT GGGAGCGAGT GGTTGATTTT ATCAAGCTGC ATTATTGCTT GTCTGATCGA
ATTGATTCTC AGTTTTGGAT AGATAATGGA GACCCGGGTA CCATGTCAGA TGAACTGAGT
AAGCGTTTAT CGCTCTGGAG TAGCTTTATC CCTAATCGAG AAGACTTCTT CAGTAAGTTT
GAGGTATTTG ATCTCGAGAA CTACCTGTAT GTTTTATACG GTATGAATTT ACCAACTCAG
GTAGCGTTAA GCCGTGCAAG TGATGAGAGC AATGCCAGGA TGCATAGCGA TAAGATTGCC
CGGATAGCGG ATCAGTTAGT CAATGAACTT CCAAATCATA GAGAGCTCTT AGAGAAGATA
AATCGCTATG GCTTGCAAGA GGTATAG
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| Protein sequence | MDIKRVVIVG GGTAGWLAAN HLGKAALNNE LLSVTLIESP DIPTIGVGEG TVPAIRQSLQ
SFGISETEFI KRCDVTFKQS IKFANWLDKE VHGQHNFYHH LFDMPSSLGK ELTQAWLSKK
GRTYAETISP QHAVCEAYKG PKTISDAEYK GHLGYAYHLN AAKFAKLLGE NAQERFNVQH
ISANVQEVIL GEDGEIKSLV TDSVGTLDFD FYIDCSGFAS LLIDKALKVP FVDKAEQLFV
DKAITVQVPT DPASAIPPFT IATAHQAGWI WDIALSNRRG VGFVYSSKYM DDETAVCKLD
HYLGGKLSEH SYRTIPMKVG YRERFWEKNC VALGLAQGFL EPLEATSILL TDFSAGFLAN
RFPTSAAQLD GMRQQFNQVM GYAWERVVDF IKLHYCLSDR IDSQFWIDNG DPGTMSDELS
KRLSLWSSFI PNREDFFSKF EVFDLENYLY VLYGMNLPTQ VALSRASDES NARMHSDKIA
RIADQLVNEL PNHRELLEKI NRYGLQEV
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