| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1188 |
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| Symbol | |
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| ID | 5612693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1414875 |
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| End bp | 1415648 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932037 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472927 |
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| Protein GI | 157374327 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGTTT TAGTTTCACC AGCGAAAACA TTAGATTATG AAAATAAAGC AGGCACAATC
GAGCATACTT TACCTAAATT GGTTCAACAT AGTGAACAGC TTATCGAAGA GTGCCGTAAG
CTCGCGCCAT CTGATATTGC ATCATTAATG AAGGTAAGCG ATAAAATTGC CGGTTTAAAT
GCGGCACGAT TTACAAGTTG GAGCCGGGAT TTTTCTACTG ACAATGCCAA ACAAGCCCTT
TATGCATTTC GTGGTGATGT CTATACGGGC TTAGATGCTG ACACGCTATC TCAGCAGAGT
ATTGAGCGTG CACAGAAACA CCTCAGAATT CTCTCAGGTT TATATGGCTT GCTCAGGCCA
TTGGATTTGA TGCAGCCATA CCGCCTCGAG ATGGGGACCC GGCTAGCCAA TATTAAAGGG
ACTAATCTTT ATCAGTTCTG GGGCGATGTG ATAACCGATG AAGTTAATCT GGCTTTATCG
GAGCAGGGCG ACCAGATTGT GGTGAACTTG GCCTCTAACG AGTATTTTAA GGCCGTTAAA
CCTAAGTCAC TAAATGGCTC TTTGATTACT CCGATTTTTA AAGATAGAAA AAATGGTCAA
TATAAGGTGA TCAGTTTCTT CGCTAAACGC GCCAGAGGCA TGATGGTGAG ATATATTCTG
GATAACAATA TTAAAACTTT CTCAGGGCTA ACCGAGTTTG ATGCTGCTGG TTATTACTAC
TGTGAAGCCG AGTCGACTGC ACAGGCGCCT GTTTTCAAGC GAGAGGAGCA GTAA
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| Protein sequence | MLVLVSPAKT LDYENKAGTI EHTLPKLVQH SEQLIEECRK LAPSDIASLM KVSDKIAGLN
AARFTSWSRD FSTDNAKQAL YAFRGDVYTG LDADTLSQQS IERAQKHLRI LSGLYGLLRP
LDLMQPYRLE MGTRLANIKG TNLYQFWGDV ITDEVNLALS EQGDQIVVNL ASNEYFKAVK
PKSLNGSLIT PIFKDRKNGQ YKVISFFAKR ARGMMVRYIL DNNIKTFSGL TEFDAAGYYY
CEAESTAQAP VFKREEQ
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