Gene Ssed_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1167 
Symbol 
ID5614054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1388253 
End bp1388588 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content46% 
IMG OID640932016 
Producthypothetical protein 
Protein accessionYP_001472906 
Protein GI157374306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCGA CAACCTCTCA GAGACTAGCC ATAGACGATC CAAGCTTAGC GCATCTATTG 
TATGCGTTGA TGACCGCTTT TCCGCTTCTT TTCCTTCCCA CCCTATTGGG GCTTATCATT
AACCTTGGGC AGAAGTCTTC CTCTGCAGGC GCGTTAGTTA GCTCTCATCT TCGCTGGCAG
AGACGTTCGA CAATCGGTTT TATGGTGTTG GGAGGAGTGG GCTTCTCTTT ATCACAAATT
TGGCTGAGTG CGATCATCTA TCTGATTGCT ACACTCTGGT TCTGCCATCG AATATTGAAA
GGTTGGTTGA ACTTAACCGA TGGTGTTGCC ATTTAG
 
Protein sequence
MISTTSQRLA IDDPSLAHLL YALMTAFPLL FLPTLLGLII NLGQKSSSAG ALVSSHLRWQ 
RRSTIGFMVL GGVGFSLSQI WLSAIIYLIA TLWFCHRILK GWLNLTDGVA I