| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1047 |
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| Symbol | |
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| ID | 5612031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1243683 |
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| End bp | 1244459 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931895 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472786 |
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| Protein GI | 157374186 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTGA ATCGACAAAT CAAGATTCTA ATTTCTACCT TCATCATTTT ATCGGGTCTG
TTTATCCCAG TCAGGGGGGA AGAGAGTCAA GAGAGCCGGA AAATTGAGAT CAGGACGATC
GCGATTCTTC CCTATGGCAT TGAGCGAAAA AATCATCTTA GCGGCATCTA TTACGATATT
GCCAATCTGT TAGCCAAAGA AGCGGGGTAT CAGGTTAACA ACCTTGTCTA TCCCTATGCC
AGAATAATGT TCGAGCTCAA GTCCGGTAAA ACTGACATGA CCATCATGTT TAAGTATGAG
GAACTAGAAG ATTACGTCGT TTACATAGCC CCCTTACCTA GTCTCAAAAC CGTCGTTATC
GGCTTAAAAG GAAGCTCTTT CGACTCGGTA GAAAACTTAA AAGGGAAAAA ACTCGCCTAT
TTAAGAGGCG CTAAATTCAG TGATGCCATA GATAGCGACC CGGATATTAT CTCCATAACC
ACTAAGGACT TTGTTCAGGC AATAAAGCTG CTTATGGTTG GCCGGGTCGA TGCCATTATC
GGCCCTATGG ACCCAATACT CAGCGCCGCG ATTCAACTGG AAGTCGGTGA AACACTTTTC
GGGGAACCTT TAGTGGTCTC CGAGCGGACT CCTTGGGTTC AGGTATCAAA AAAGAGTCTG
GATCGTATAT CGGTAGATAA GCTTAGAACG CTTTTTGAAG CATTTGAAAA ACGTGGAGAG
CTGGAAAAAA TACGCCAAAA GTACATCAGC AGTAACAAAG CTGAGTCAGA CAAGTAG
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| Protein sequence | MIVNRQIKIL ISTFIILSGL FIPVRGEESQ ESRKIEIRTI AILPYGIERK NHLSGIYYDI
ANLLAKEAGY QVNNLVYPYA RIMFELKSGK TDMTIMFKYE ELEDYVVYIA PLPSLKTVVI
GLKGSSFDSV ENLKGKKLAY LRGAKFSDAI DSDPDIISIT TKDFVQAIKL LMVGRVDAII
GPMDPILSAA IQLEVGETLF GEPLVVSERT PWVQVSKKSL DRISVDKLRT LFEAFEKRGE
LEKIRQKYIS SNKAESDK
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