Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1040 |
Symbol | |
ID | 5612831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1235745 |
End bp | 1235927 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640931888 |
Product | hypothetical protein |
Protein accession | YP_001472779 |
Protein GI | 157374179 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00942634 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.682604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCTAT CGAATGCTGA GCAGTGGGCT CAACTCTGTC ATCGTCAAGC TGAGCTTGTC GAAAGTCTCT CAAAAACTTT CCCGGAACGT CGTGAAAATC ATACCGATTT AGGTCTCTGC TGGCGAAGGC TGGAACAGCA AGTTAGACGT GGCGAGACGC CGCGAGTCGA TGATATAAAG TAG
|
Protein sequence | MHLSNAEQWA QLCHRQAELV ESLSKTFPER RENHTDLGLC WRRLEQQVRR GETPRVDDIK
|
| |