| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0984 |
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| Symbol | |
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| ID | 5610261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1166673 |
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| End bp | 1167848 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931832 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001472723 |
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| Protein GI | 157374123 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.374892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAG TGCATTTTGA CTGGACAGAT CCCCTGCAGT TTAACGCTTT ACTCTCTCAG
GAGGAGAGGA TGGTGCGTGA CAGCGTTTAT GACTACGCTC AGGACAAACT CATGAGCCGG
ATATTGATGG CAAACCGAGA TGAACATTTT GATCGTGACA TCATGAACGA ACTCGGTGAA
ATGGGCTTGC TGGGTGCGAC CCTGCCAGAG AAGTATGGCT GCTCAAATGT CAGCTATGTG
AGCTATGGTC TGATAGCTCG TGAAATTGAA CGGGTCGATA GCGGGTACCG CTCGGCAATG
AGTGTGCAGT CTTCTCTCGT GATGCATCCC ATTCATGCCT ATGGTACGGA AGAGCAAAGG
GGCAAATACC TGCCAAAACT TGCCAGCGGC GAATGGGTCG GTTGTTTCGG GTTAACGGAG
CCCGATGCTG GCTCAGATCC CGGGGGAATG AAGACCAGAG CCGAACGCAT AGAGGGTGGC
TATCGAATTA ATGGGGCAAA AATCTGGATA ACCAATTCAC CGATTGCCGA TATTTTCATT
GTATGGGCCA AACTTGAGGG CAAGATCCGT GGTTTTATTC TCGAGAAAGG GATGCCAGGG
CTGAGTGCGC CGAAAATTGA GGGTAAATTT TCACTTCGAG CCTCTGTTAC CGGGGAGATC
GTCATGGATA ATGTCGAAGT GCCTGAAACG GCTCTGATGC CAAATGTGGA AGGATTGAAG
GGGCCATTTG GCTGCTTGAA TAAGGCTCGT TATGGTATCG CCTGGGGAGC ATTAGGTGCC
GCCGAGTTTT GCTGGCATGC CGCTCGGCAA TATACACTGG ATCGGATCCA ATTTAATCGT
CCCTTAGCGT CGAATCAGTT GATTCAAAAG AAATTGGTCG ATATGCAAAC AGAGATAAGC
CTGGGTCTCT TCGCGTGCTT GCAGGCAGGA CGCCTAATGG ATAATGACGC ATTGGCCGTC
GAAGCCATCT CTATGATTAA ACGCAACTCC TGTGGTAAAG CCCTGGACAT TGCCCGTATG
TCTCGCGATA TGCATGGCGG TAACGGAATC TCCGATGAGT TTCATATTAT TCGTCACGTT
ATGAATCTGG AGGCGGTAAA CACCTATGAG GGAACCCATG ATATTCACGC ATTGATCTTA
GGAAGGGCTC AGACAGGCAT CCAAGCATTT TGTTGA
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| Protein sequence | MARVHFDWTD PLQFNALLSQ EERMVRDSVY DYAQDKLMSR ILMANRDEHF DRDIMNELGE
MGLLGATLPE KYGCSNVSYV SYGLIAREIE RVDSGYRSAM SVQSSLVMHP IHAYGTEEQR
GKYLPKLASG EWVGCFGLTE PDAGSDPGGM KTRAERIEGG YRINGAKIWI TNSPIADIFI
VWAKLEGKIR GFILEKGMPG LSAPKIEGKF SLRASVTGEI VMDNVEVPET ALMPNVEGLK
GPFGCLNKAR YGIAWGALGA AEFCWHAARQ YTLDRIQFNR PLASNQLIQK KLVDMQTEIS
LGLFACLQAG RLMDNDALAV EAISMIKRNS CGKALDIARM SRDMHGGNGI SDEFHIIRHV
MNLEAVNTYE GTHDIHALIL GRAQTGIQAF C
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