Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0971 |
Symbol | |
ID | 5614232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1154315 |
End bp | 1154944 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931819 |
Product | hypothetical protein |
Protein accession | YP_001472710 |
Protein GI | 157374110 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0344388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA GAAAACAGTT ACCGATTTCG GCTTTAATTG CGGCGTCAGC CCTGATCTCC ACTCAGGCCA TGGCTGAAGT ATTTGTCGCA CCGTTTGGTG GTTATAGTTT CGGTGCCAGT GATTTTTCTA TCACAGATGA GAAAACCGAT GAATTGGGTT CACTTAAGAT CTCTGAATCA AATCATTACG GCTTCATGGC GGGTGTGACG ACGAAAGACC CTGGAGATAT CTATTTTCTC TATAGTCATC AAGGAACAGA GCTTAGATCT GGTGGCAGTT TCAGCCCAAA TGTTATTACT GACTTAAACG TGGATTATTT CCATCTCGGT GGCTCACTCT ATTTTCCCAA TGGCAATCTG AAGCCCTATG TAACGGCAAG CCTTGGTCTG ACTCAGATGC GTCCGGGTGA TAATTACTCG ACGGAATCTC GATTTTCAAT GGGCTTTGGT GCAGGTATCG AATACCAGAT GACCGAAGCC TTCTCACTGT TTGCCGATGC CAGGGGCTAT GCCACATTTG TTAATAGCAG TAGCGCTCTG TTTTGCGATG GTGGGGACTG CCTCTGGTCT ATCAGTTCCG ATATCATGTG GCAAGGACAG GCTAACCTCG GCGTTAAGCT TAAGTTCTAG
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Protein sequence | MKIRKQLPIS ALIAASALIS TQAMAEVFVA PFGGYSFGAS DFSITDEKTD ELGSLKISES NHYGFMAGVT TKDPGDIYFL YSHQGTELRS GGSFSPNVIT DLNVDYFHLG GSLYFPNGNL KPYVTASLGL TQMRPGDNYS TESRFSMGFG AGIEYQMTEA FSLFADARGY ATFVNSSSAL FCDGGDCLWS ISSDIMWQGQ ANLGVKLKF
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