| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0879 |
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| Symbol | |
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| ID | 5613938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1047092 |
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| End bp | 1047838 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640931727 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472618 |
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| Protein GI | 157374018 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00268947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATTG GTTGCTGTTG GTTTGATATG AGTCGAAAGA CTTTGTCCAA TCTGATTAAT
GACACCAGTT GGAAAATGTC TGCAGTTGAA TTCTCTGTGC TGGAGATGCT GGTTAAACAT
CGCGGTAAGG TGCTCTCTAT TCAGGAATTA CTGCAGGGGA TGCCTGTCGA AAATCGTAAG
GTAGAGATAT TAACCGAATC TATAGAGCGG ATCTGTTTTT ACCTTGAGAA GCGATATGCC
TCCTTGATCG AACGCGTCGA TGATCAAGGT TATGTCTTAC ATAATAAGCC TTCGGTTAAA
TCAGGCGAGC TTTCCTCTAC ACCTTTTAGA AGCATCTCTA AGAAGCACTA CAGCATATTG
GTTGCTCAAA TCTTATTATT GATAGTTCTG ATCTACTCAT TTTTTGAGCC TGCAGTGGAT
ATCAAGCCCG AAAATAAACA TGTGCTGACA ACACAATCCG GTACCCTCTC CTATTTCCCA
TCCTTTAGTT CAGAGGAGCA GGAACTAGCC TATTTTTATC AGAATAATCA TTTTATAGAG
TCTATCGAAA CCTGCTCTGT TACGACGTGG CGACAGATTT TTTTATCTGT CTCCTCTGAT
AACCCGGAAA ATGGCGTTAT CAGTATTGCG CTTAGAAATG ATACTGGTGG AAAAGCCGAA
ATGAAGACTC TGAAGATAGT GCCAATAGAT GGACAGTGGA ATTTCATCAA TCATGCCTGG
TTAAAAAAAG TTGGGATCTG TGATTAA
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| Protein sequence | MQIGCCWFDM SRKTLSNLIN DTSWKMSAVE FSVLEMLVKH RGKVLSIQEL LQGMPVENRK
VEILTESIER ICFYLEKRYA SLIERVDDQG YVLHNKPSVK SGELSSTPFR SISKKHYSIL
VAQILLLIVL IYSFFEPAVD IKPENKHVLT TQSGTLSYFP SFSSEEQELA YFYQNNHFIE
SIETCSVTTW RQIFLSVSSD NPENGVISIA LRNDTGGKAE MKTLKIVPID GQWNFINHAW
LKKVGICD
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