| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0830 |
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| Symbol | |
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| ID | 5612456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 984810 |
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| End bp | 986378 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931678 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001472569 |
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| Protein GI | 157373969 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATG CGAATCTTAA AAATCAACTG AACACCTATC TGCAAAACCT CAAGCGCCCA
GTTGAACTTG TCGTGTCTGC AGATGACAGC CCTAAAGCCC AAGAGCTCAG ATTATTAGCC
CGGGACATTG AGAGTCTGTC ACCATTAGTT AGCATTTCTG AAGCCCAAGG CAAGCGTATG
CCATCGATGA AAGTGACTAA TGCAGAGAGC ATGACAGATA TTACGTTTGC CGGCCTGCCT
ATGGGGCACG AGTTTACCTC TCTTGTTTTA GCTCTGCTTC ATACCGGTGG TCACCCATTA
AAGCTGGATG ATGCGATTAT TGCGCAGATA AAGGCATTGT CGGGCGAATA CCATTTTGAA
ACCTATGTTT CTCTGAGTTG CCAGAACTGC CCGGATGTTG TGCAGGCACT CAATATGATG
GCGGCGATCA ATCCGAATAT CACCAACGTG ATGATCGACG GTTCTCTGTT TCAAACAGAG
GTCTTTGAGC GAGATATCTT AGCCGTACCT TCTGTTTATC TTAATGGTGA ACTCTTCGCT
CAAGGGCGTA TCAGCTTAAC TGAAATTTTA AATAAAATTG ATACCGGAGC CGTAGCCCGT
CAGGCAGAGG CTCTGGCGGA AAAAGAGCCT TTCGAAGTCT TAGTCGTTGG TGGTGGCCCG
GCTGGAGCAT CGGCTGCTAT CTACGCGGCA CGTAAAGGGT TGCGCACCGG GATCGTGGCC
GACAAATTTG GTGGCCAGGT TGCCGAAACT GTGGGTATTG AAAACTTTAT CTCAGTTAAG
GCCACCGAAG GCCCTAAGCT GGTGGCAAAT CTCGAGGCCC ATGTTCATGA ATATGATGTC
GATATCATGG ATAACCAAAG AGCGCTAAGC CTTAAGTCCG GTGAACTGTT CGAACTGGAG
CTGGAGAATG GCGCGGTGCT CAGGAGTAAG ACTGTACTTC TGGCGACGGG CGCAAGATGG
CGTGAAATGA ATGTACCTGG TGAGCAGGAG TATCGTGGTA AAGGTGTGGC TTACTGCCCG
CATTGTGATG GCCCGCTGTT TAAAGGTAAA CGTGTCGCCG TTATTGGTGG TGGTAATTCA
GGCATAGAAG CGGCAATCGA TCTGGCTAAT ATCGTCGAGC ATGTCACCGT GCTGGAGTTC
GACACTAAGT TAAGAGCCGA TGAGGTCTTG CAGCGTAAAG CGGCTTCAAT GGGTAATATT
GAGATCATCA CTCAGGCGAT GACAACCGAG GTCAATGGTG ATGGTAAGCG TGTCAACGGT
CTCAATTATA CAGACAGAGC AACGGGTGAA TCTCATCATG TAGCGCTTGC CGGTATCTTC
GTTCAAATTG GCTTGATACC GAACTCTGAA TGGTTAAAGG ACACTATCGA TCTGACCGTC
AGAGGCGAGA TCATCGTCGA TGGTAAAGGT GAAACATCCG TGCCTGGTAT CTTTGCCGCC
GGTGATGTAA CTAACTCGGC TTTCAAGCAG ATTATTATTG CCATGGGCAG TGGCGCAACT
GCCTCTCTCG GTGCTTTTGA TTACCTTATC AGGCATAGCG AACCCGAGCA GGAACAGGTT
GCCGCCTAA
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| Protein sequence | MLDANLKNQL NTYLQNLKRP VELVVSADDS PKAQELRLLA RDIESLSPLV SISEAQGKRM
PSMKVTNAES MTDITFAGLP MGHEFTSLVL ALLHTGGHPL KLDDAIIAQI KALSGEYHFE
TYVSLSCQNC PDVVQALNMM AAINPNITNV MIDGSLFQTE VFERDILAVP SVYLNGELFA
QGRISLTEIL NKIDTGAVAR QAEALAEKEP FEVLVVGGGP AGASAAIYAA RKGLRTGIVA
DKFGGQVAET VGIENFISVK ATEGPKLVAN LEAHVHEYDV DIMDNQRALS LKSGELFELE
LENGAVLRSK TVLLATGARW REMNVPGEQE YRGKGVAYCP HCDGPLFKGK RVAVIGGGNS
GIEAAIDLAN IVEHVTVLEF DTKLRADEVL QRKAASMGNI EIITQAMTTE VNGDGKRVNG
LNYTDRATGE SHHVALAGIF VQIGLIPNSE WLKDTIDLTV RGEIIVDGKG ETSVPGIFAA
GDVTNSAFKQ IIIAMGSGAT ASLGAFDYLI RHSEPEQEQV AA
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