| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0789 |
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| Symbol | |
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| ID | 5609920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 935907 |
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| End bp | 936965 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931633 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_001472528 |
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| Protein GI | 157373928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.106685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00135027 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGTAAAA AGAAACCCCT AAGTCAAGGC CAACGCCGCC GTATGCGGGC CAATCAAGAG
AAAAGACTGC AGCGGAAAGA TTCTGGCAGT AATGCCTCTG AATTACAGGA TAGTTCACTT
GGGCCAGAAC AGCTCGGAAC CGTCATATCT CGTTTTGGCC AACATGCCGA TATTGAAACA
GAATCGGGAC AACTGGCTCG TTGTAATATT CGTAGAAATA TTCAAAGCCT GGTCACCGGC
GACAAAGTTG TCGCAAGATT AGCTAAAGAT ATTGAAACAG GAATTGCCGG AGTCGTGGAA
GCTGTTCATC CCCGTCACTC CTCTCTTTCT CGTCCCGATA TGTATGATGG CATTAAGATC
ATTGCCGCCA ATATCGATCA AATATTGATA GTATCTTCTG TTGTACCAAG CTTCACGACT
CAGATCATCG ATCGCTACCT TGTTGCAGCT GAAGACACAG GCATTTCCCC CATTATTATC
CTCAATAAGA TCGATCTCCT TACTGATGAG GAGCGACCTG AAGTTGAAGC GGCTCTCGAG
CGTTATAGAG ATATTGGCTA CCCCGTCTAT CAGGTCAGCA GTAAGTCAGG ACTAGGCGTG
GAAGGGATAA AAGATCTGCT AAATGAGAAC GTCAGCGTTT TTGTTGGCCA GTCCGGTGTT
GGCAAGTCTT CATTGATCAA TGCCATGATG CCGGATGCGG AATTACAAAT TGGTGATGTA
TCTGAAAACT CAGGTTTAGG CCAACATACA ACGACTACGG CAAAGTTACT TCATTTTGCC
AGCGGTGGTG ATCTTGTTGA CTCTCCGGGT GTTCGCGAAT TTGCTTTATG GCACCTTCCC
GCAGAGCGGG TAGGATGGTG CTTCATTGAA TTTCGGGACT ACCTTGGAAC CTGTAAATTC
AGAGACTGTA AGCACAAGAA CGATCCCGGA TGTGCAATAA CAGCAGCATT TAATGATGGT
AAGATTGCAG AAGACAGATA CAACAACTAT CACAAAATCA TCGCTAGCTT AGATGAACAG
CGTCATGCTC GACACTTCAG ATCCGGTTCT GATGAATAA
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| Protein sequence | MSKKKPLSQG QRRRMRANQE KRLQRKDSGS NASELQDSSL GPEQLGTVIS RFGQHADIET
ESGQLARCNI RRNIQSLVTG DKVVARLAKD IETGIAGVVE AVHPRHSSLS RPDMYDGIKI
IAANIDQILI VSSVVPSFTT QIIDRYLVAA EDTGISPIII LNKIDLLTDE ERPEVEAALE
RYRDIGYPVY QVSSKSGLGV EGIKDLLNEN VSVFVGQSGV GKSSLINAMM PDAELQIGDV
SENSGLGQHT TTTAKLLHFA SGGDLVDSPG VREFALWHLP AERVGWCFIE FRDYLGTCKF
RDCKHKNDPG CAITAAFNDG KIAEDRYNNY HKIIASLDEQ RHARHFRSGS DE
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