| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0757 |
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| Symbol | rpsF |
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| ID | 5611022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 902570 |
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| End bp | 902989 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931601 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001472496 |
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| Protein GI | 157373896 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.228949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000160404 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ATGAAATCGT ATTTTTGGTT CACCCTGATC AGAGTGAACA AGTACCTGGT
ATGATTGAGC GTTACACGGG TATTCTTACC CAAGCTGGCG GTCAAGTACA TCGTTTAGAA
GATTGGGGCC GTCGTCAACT GGCTTACCCA ATTATCGAAC TGCATAAAGC TCACTATGTT
CTTATGAACG TAGAAGCATC TGCAGAGTCG GTTGAAGAAC TTGAAACAGC TTTCCGTTTC
AACGACGCTG TTCTGCGTAG CATGGTTATG CGTACTAAAG CAGCCATCAC TGAAGCATCT
CCAATGGCTA AAGCGAAAGA CGAGCGTGAT TCACGTCGTT CTAGCGAAGG CGAGCGTCGT
AGTGCGCCTG CTGAAGCAAC TGAAGAAGTT AAAGAAACCG CTGAAAAAGC AGCTGAGTAA
|
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| Protein sequence | MRHYEIVFLV HPDQSEQVPG MIERYTGILT QAGGQVHRLE DWGRRQLAYP IIELHKAHYV
LMNVEASAES VEELETAFRF NDAVLRSMVM RTKAAITEAS PMAKAKDERD SRRSSEGERR
SAPAEATEEV KETAEKAAE
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