| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0755 |
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| Symbol | |
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| ID | 5611020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 900463 |
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| End bp | 901212 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931599 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472494 |
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| Protein GI | 157373894 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.684175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000180736 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGACAAAC TAACACCAAA GCATGCCGAT CTACACCACA ACTTGGTTTT AGCGTTGAAT
CAGTTTGGTT TTAACGGCTT TAATTTCACG TTAAGCAGTG AGTTAGCCGG TGAGATTAGC
ATCAATCTGT CTAAGTTGGA GGAGTTCAGC CCCCGCGTCA TGAAACGTGA GAAATTTACT
CTAGTATCGT GCAACCGAGC TCTGGAGATC CGTCGTTATT ATGTAAGCTT TTTTGCCGAT
CGAAGAGAAA GCGGTTTCAC CATGGCCAGG AAGCTAGGGG CAACTATTTG GGACGGTCCG
GATCTGAGCA AACCCAGTGG GCATCAGCTA AGGGATTTTC TGCATCAACG ACAGGTGAGC
AGCGTCGCCT TGTGGCTGGT GGAGACTAGC TCCCATTGGA CAGGTTATTT CACCCTGTTT
TCTAACCAGC AGTACACGCA GCTTTGCCGC AACTGTTGGG AGAATGGCGC AGAAATTGAT
GCCTTGCTAC GTCTCTATGG TGAATTCTAC TCCTCGGAGT TTAGTGAGAA GCTTAATCCC
ATCTTCAATT ACGATATCAT CAACCAAAAG TCGCTTAATA TACTTAACCT GTTGGCAGAG
GGGGGCAGCA TCAAGGAGAT CAGTGCCCGT CAGAATCTCT CCGAACGGGG CATATGCTAT
CACGTGGACA GGATGAAGGA GATACTCTGC TGCCACAATC GATATCATCT GGTGCATAAG
GCTCATCAGC TTGGCTTACT TCGAAAGTAG
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| Protein sequence | MDKLTPKHAD LHHNLVLALN QFGFNGFNFT LSSELAGEIS INLSKLEEFS PRVMKREKFT
LVSCNRALEI RRYYVSFFAD RRESGFTMAR KLGATIWDGP DLSKPSGHQL RDFLHQRQVS
SVALWLVETS SHWTGYFTLF SNQQYTQLCR NCWENGAEID ALLRLYGEFY SSEFSEKLNP
IFNYDIINQK SLNILNLLAE GGSIKEISAR QNLSERGICY HVDRMKEILC CHNRYHLVHK
AHQLGLLRK
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