Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0723 |
Symbol | |
ID | 5611799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 868806 |
End bp | 869654 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640931567 |
Product | hypothetical protein |
Protein accession | YP_001472462 |
Protein GI | 157373862 |
COG category | [R] General function prediction only |
COG ID | [COG1660] Predicted P-loop-containing kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.13975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG TTATGGTATC CGGTCGGTCC GGATCAGGAA AATCTGTCGC CCTCAGGGTT TTAGAGGACC TTGGATACTA TTGTGTCGAT AACTTGCCTC TACCGCTCAT GGACTCACTA CTCGATCAAC TTAAGGGTAG TACCGAACTT GTCGCCATCA GTGTCGACGT TCGTAACATG CCTGAGCAGG AAAAAGAGCT CGAAAAACAA CTTTCCAACC TGCCTGCAGA TACTGAATTA CTCAGTTTCT TTCTCAACTC TTCAGATGAA GTTCTGCTGA AGCGATACAG CGAAACCCGC CGACTCCATC CACTATCGAG AAGTAAAACT TCTTTGAAAG AAGCGATTGA GCATGAAAGG ATACTACTCG AGCCGGTTTC TAAGCTGGTC GATCACTACA TAGATACTTC AAACCTCAAT ATCTATGACC TGAGTAATCA GGTACGAGAG ATCTTATTGG GAACTGTAGA TAAAGAACTC GTCATTAATT TTGAATCTTT CGGCTTCAAA TACGGCATGC CCGCAGAAGC CGACTTTATG TTCGATGTTC GTTTTCTCCC CAACCCTCAT TGGGAGCCAG AGCTAAGACC CATGACAGGC CTCGATGAAC CTGTACAGCT GTTTCTCAGC CAGCAGCCTA TGGTTAATAA ATTCATCTGG CAAATTGAAA ACCTGTTAGA AACGTGGCTG CCGCACCTTG AAAGAAATAA TCGTAGCTAT CTGACTATCG CCATAGGCTG TACCGGCGGA CAACATAGAT CTGTCTATGT CACCGACCAA TTAGCGAAAC TATTTAGCAA TAGCAAACAT ATGGTTAAAG CCCGCCATCG TGAACTGAAC AATGCCTAA
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Protein sequence | MKLVMVSGRS GSGKSVALRV LEDLGYYCVD NLPLPLMDSL LDQLKGSTEL VAISVDVRNM PEQEKELEKQ LSNLPADTEL LSFFLNSSDE VLLKRYSETR RLHPLSRSKT SLKEAIEHER ILLEPVSKLV DHYIDTSNLN IYDLSNQVRE ILLGTVDKEL VINFESFGFK YGMPAEADFM FDVRFLPNPH WEPELRPMTG LDEPVQLFLS QQPMVNKFIW QIENLLETWL PHLERNNRSY LTIAIGCTGG QHRSVYVTDQ LAKLFSNSKH MVKARHRELN NA
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