| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0692 |
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| Symbol | |
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| ID | 5612407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 834112 |
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| End bp | 835326 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931536 |
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| Product | histidine kinase A domain-containing protein |
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| Protein accession | YP_001472431 |
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| Protein GI | 157373831 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTA AGCTCAGCTT AAAGCGTGTC TATCAGGTCT ATGGCTTATG TTTTTTGGCG
ATAACCTTGA TCATCAATAG TTTCATCCCG TTGTGCATGA TGTGTACCGG CATGTTCAGC
ATGCATGACA TTACCATGAG CAATGCGGCG CAAGCGGCAG CGCTTTATAC CAGCCCGAGA
AATAATCTCT TTCAAACAGA CAATATTACG GTATTTCCCA ATTGGGAGTC GGTGCCGGAA
CGGGTGAAGG CGATAAACGG AGGCGTTGCT CCCGATAAGC CACAAAATGT GAAGCACCAG
CATACTGACG GGCAGTTTAT CGATGCCCTG ATGTTGCATC AGGGGCAAGA GGGTCAAGAG
AGCTATGTGT GGCTGCATTA CAACGCGACT CACGATCTCG AATTTGCGCC GAAAAACATG
GCAGCCATCT TACTCTTAGT CATCATGACA TTTACCGTGA ACGCCATTCT GGCTTGGTAT
CTACAGAGCC GGGTGATTTC GCCGGTGCAT GAGATCAGCC GGGCGATAAA GCAACACGAC
TGGCAGAAGA TGCAACAGCT TCGTTTCCCT AAGCAGTGTT ATGCCGAACT TCAATCGATC
GTCGATGCCC TGGACAGCTC GATTAAACAG CTCAAGGAGG CCCAGCAGCG CGAGTTATCT
TTCCTGCGGT TTGCCAGCCA TGAACTGAGA ACGCCTATCG CCATATGTCA GTCTTCATTC
GATATTCTGA CCCTGCAGCA GGGAAAGCTG ACGGGACCAA CCCTACATGC CAGTCAGGCA
ACGACTCAGA TGAAATCGAT CACCGAGACA CTGCTATGGC TGATGAGCTC AGATTGCAGC
CCGATGAATA GCAGTAATGT GAAGCTGGCA TCTCTACTGG AAAGCATCAT CTATGATCAA
AAATATGCTC AGGGGAGTGA TGTACCGGTC GAACTGAAGT GCGATGAAAC CGAGCTGTTT
GTGCTCAAGG AGCCTTTAAC TATTGTGCTG AACAACTTAG TGCGTAACAG CTTAGAGCAT
GGTGCTAAAG GTATCTCCAT CGTTCAGGCT GGTAACAGAA TCGATATCGT TAACCCGCTG
TCCCTGCATA ACTCCAGCGG CTTCGGGCTG GGCTTGATGT TAGTCGAAAG GTTGGCAAAA
CAGCTTAATT GGCACTATTC GACCAGTAAC GATCATAACT CCTTCAGGGC TACGCTCATC
ATACGGCCCT CTTAA
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| Protein sequence | MKPKLSLKRV YQVYGLCFLA ITLIINSFIP LCMMCTGMFS MHDITMSNAA QAAALYTSPR
NNLFQTDNIT VFPNWESVPE RVKAINGGVA PDKPQNVKHQ HTDGQFIDAL MLHQGQEGQE
SYVWLHYNAT HDLEFAPKNM AAILLLVIMT FTVNAILAWY LQSRVISPVH EISRAIKQHD
WQKMQQLRFP KQCYAELQSI VDALDSSIKQ LKEAQQRELS FLRFASHELR TPIAICQSSF
DILTLQQGKL TGPTLHASQA TTQMKSITET LLWLMSSDCS PMNSSNVKLA SLLESIIYDQ
KYAQGSDVPV ELKCDETELF VLKEPLTIVL NNLVRNSLEH GAKGISIVQA GNRIDIVNPL
SLHNSSGFGL GLMLVERLAK QLNWHYSTSN DHNSFRATLI IRPS
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