| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0680 |
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| Symbol | |
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| ID | 5612460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 821265 |
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| End bp | 821756 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931524 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_001472419 |
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| Protein GI | 157373819 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0710667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATTT TTACAACCAA CATCGGCGAT ATCACTATAG AGCTCGATGT CGACAACGCC
CCGGTCAGTG CAAAAAACTT CCTGAGATAC TGTCAGGATG GATTCTATGA AGGCACGATT
TTTCATCGCG TGATCAAGGG CTTTATGGTG CAAGGGGGTG GCCTGACTGC CGATATGGAT
GAGAAGCCGA CTCGCGCCGC TATCGTTAAC GAGGCTAACA GAGGCTTGAA GAATGTCGTG
GGTTCCATCG CCATGGCGCG CACCGATGCC CCGCACTCGG CCACCGGGCA ATTTTTTATA
AACTTAGCCA ACAACAGTTT CCTTGACCAT ACCGCGACCA CCAATGCGGG TTGGGGTTAT
GCCGTATTTG GCAAGGTCAC CGCCGGTATG GATGTCATCA AAAAGATAGA GAAAGCCAAA
ACCACCAGTG TCGCGGGTCA CGACGATGTG CCACGAGAGC CAATTGTTAT TGAGAGGGTT
ACCGTGATTT AG
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| Protein sequence | MIIFTTNIGD ITIELDVDNA PVSAKNFLRY CQDGFYEGTI FHRVIKGFMV QGGGLTADMD
EKPTRAAIVN EANRGLKNVV GSIAMARTDA PHSATGQFFI NLANNSFLDH TATTNAGWGY
AVFGKVTAGM DVIKKIEKAK TTSVAGHDDV PREPIVIERV TVI
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