| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0654 |
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| Symbol | |
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| ID | 5613459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 794301 |
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| End bp | 795107 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931499 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472394 |
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| Protein GI | 157373794 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAC ATCAACATAC AGCTCAATAT ATTACTGATC AGTTACTAAC AGCGCTGCAG
CCCTATGCAC AAAAGTTAAT GAGCAAGCCG CCACAAGGTG AACTTCAAAA AAGGCAGCTA
CTAAGAGCTA CTTTAAATAC TCTTCCTCCT TTTACCTTGA GTGAGCAAGA AACTGCGCTG
CTGGATGACT TATTGCAGCA AGAGCTGGCA GTAAAATCGG TAACCACTAT TGATGCGCTG
CCTACGCTAG TGCGCTTTGG GAAAGCTGAT GTGAAACTTT GGCAGGGTGA CATAACACGA
CTTGCCGCCG ATGCGATTGT TAACGCAGCG AATAAAGAGC TGCAAGGGTG TTTTCAGCCG
CTGCACAGCT GTATTGATAA CGCCATACAC TCAGCTTCAG GTGTCAGGCT ACGAGATGAT
TGCGCCGTAA TTATCAAGGC TCAAGGGCAA TTCGAAGAAA CTGCTAAAGC TAAAATAACC
AGCGGGTACA ATTTACCTTG CCAATATGTG CTTCATACAG TGGGTCCTAT AGTGCAGGGG
AATGTAACTG GTGAGCATCA AAAGTTGCTG CAATTATGCT ATGAAAATTG TTTAGCGTTA
GCCGATCAAA CCTTAGGCAT TAACAGTATT GCTTTTTGTT GTATTTCTAC GGGAGTTTTT
GGTTATCCAC AAAAGCCTGC AGCTCAGGCT GCTGTTAGAG CCGTTCAGCA GTGGCTGCTA
AACAACCCAA ACTCCAACAT TGATACCGTC ATTTTTAATA CGTTTAAGCC CGAAGATACT
CGTTTGTATC AGCAGTTTTT ACAATAA
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| Protein sequence | MSQHQHTAQY ITDQLLTALQ PYAQKLMSKP PQGELQKRQL LRATLNTLPP FTLSEQETAL
LDDLLQQELA VKSVTTIDAL PTLVRFGKAD VKLWQGDITR LAADAIVNAA NKELQGCFQP
LHSCIDNAIH SASGVRLRDD CAVIIKAQGQ FEETAKAKIT SGYNLPCQYV LHTVGPIVQG
NVTGEHQKLL QLCYENCLAL ADQTLGINSI AFCCISTGVF GYPQKPAAQA AVRAVQQWLL
NNPNSNIDTV IFNTFKPEDT RLYQQFLQ
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