| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0626 |
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| Symbol | |
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| ID | 5613038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 757397 |
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| End bp | 758791 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931471 |
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| Product | PhoH family protein |
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| Protein accession | YP_001472366 |
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| Protein GI | 157373766 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAG ACGACAGAAA GTTGTTTGTA CTGGATACCA ATGTATTACT ACATGAACCC
TTAGCTATCT ATTCATTTAA AGAGCATGAT GTAGTGGTCC CGATGACAGT TCTGGAAGAA
CTGGATCAGA TTAAAGATAG AAAACGCGAT GTAAGTAGAG ATGCCCGGGT GGCGATCAGA
GCACTCGAAG ATATTCTTGG CAACAAAACG ACCCCCGAGG AGATAGTTCA AGGCGTTAAA
CTTCCCCGGC GAGAAGATCA TGGTGATGCT TGCGGCACAC TCGCTATCTT CCCCGATCAT
CAACTCGAAC AGACCGAATC ATCACTTCCC CTGAACAATA ACGACAACCG TATTATCAAC
ACGGCTTTAC ACCTGCAAAA ACTCCATCAT CCTCGCACAG TCGTTTTGGT GACGAAAGAT
ATCAATATGC GCCTCAAAGC CAAGGGGGCC GGGATCATAT TGGTTGAAGA TTATCGTACC
GACCAGTTGA TCGATGATAT TCGCTTCTTA ACCAAGGGCT TTCACCAGTT TAGTGGCGAT
TTTTGGGAGA GAAAGGAGCA CGTCTCTACC GAAACTCATG GCCGGCACAC CTACCATACT
GTTCCGGTTG CCGAGGTGGG TGATGAAAAC TTCTATAGCA ATCAATATCT TTTTGATGAG
GATTCGAACT TTTGTGGTCG AGTCGTTGAG CGTGGCGACA CAGACCTGAA ATTACTGGAT
CTGGGTAAAG ATAGACTCCT TAATCTCGAT GCATGGGGGA TAAGGCCTAA GAATATCTAT
CAGGGCATGG CTCTGCAGGC GTTGCTCGAT CCCGATATCG ATCTGGTCAT TCTGACCGGG
CCGGCGGGCT GTGGTAAGAC GCTATTGGCT ATGGCCGCAG CATTGGAGTT GGTGGTAGAA
CGAGGCATGT ATGAAAAGGT CATCGTCACC CGAAATACAC CGGAAATCGC CGAGTCCATA
GGCTTCTTGC CGGGTACCGA GGAGGAGAAG ATGGCACCCT GGCTTGCGGC CATTACCGAT
ACTCTCGAGG TGCTGCACAA GAATGATGTT AACCCTAGCG GTAGCATGAA TTACATCATG
GATAAGGCTA ACATTCAGTT TAAGTCCATC AACTTTATGA GAGGACGTTC TATTCAGAAT
TCGGTCGTGC TGTTGGATGA GTGTCAAAAC CTGACAGCGT CTCAGATCAA AACCATGATC
ACCCGAATGG GAGAGGGAAC TAAGCTCATC TGTAGTGGTA ACTTGTCTCA GATTGATACC
AACTATCTAA CTGCAGTTAC ATCGGGATTA ACCTATATTG TCGAGCGGTT TAAAGACTTC
GAGGGCAGCG CCAATATCTA CCTCAATGGT GTTGTTCGCT CACGTTTGGC CGAGTTTGCC
GAGGAGAACT TGTAG
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| Protein sequence | MEQDDRKLFV LDTNVLLHEP LAIYSFKEHD VVVPMTVLEE LDQIKDRKRD VSRDARVAIR
ALEDILGNKT TPEEIVQGVK LPRREDHGDA CGTLAIFPDH QLEQTESSLP LNNNDNRIIN
TALHLQKLHH PRTVVLVTKD INMRLKAKGA GIILVEDYRT DQLIDDIRFL TKGFHQFSGD
FWERKEHVST ETHGRHTYHT VPVAEVGDEN FYSNQYLFDE DSNFCGRVVE RGDTDLKLLD
LGKDRLLNLD AWGIRPKNIY QGMALQALLD PDIDLVILTG PAGCGKTLLA MAAALELVVE
RGMYEKVIVT RNTPEIAESI GFLPGTEEEK MAPWLAAITD TLEVLHKNDV NPSGSMNYIM
DKANIQFKSI NFMRGRSIQN SVVLLDECQN LTASQIKTMI TRMGEGTKLI CSGNLSQIDT
NYLTAVTSGL TYIVERFKDF EGSANIYLNG VVRSRLAEFA EENL
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