| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0619 |
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| Symbol | |
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| ID | 5612088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 748056 |
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| End bp | 748778 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931464 |
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| Product | 1-acylglycerol-3-phosphate O-acyltransferase |
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| Protein accession | YP_001472359 |
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| Protein GI | 157373759 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTTTTAA TCCTCAGATC GTTGATTTTA GCAGTCATGT TACTGCTATC ATTTGTTTTT
GGTGGCCTTT TCTGTTTAAT CAGACCGCGT CATCGTGACA ATGTACACAT GTTCGCTAAA
ATATTTTCTT TCGCTGCGCC GGTATTAGGT ATCAAGGTGA TTGTTCGTAA ACCTGAAGTG
AAAACAGAAG AACCGTGTGT CTTTCTTGCT AATCATCAAA ATAATTTCGA TATGTTCACC
CATACTGCGG CGGTACCGAA AGGGACGGTG AGCTTAGGCA AAAAAAGTTT AGCCTGGGTG
CCATTTTTCG GCCAGATCTA CTGGTTGTCC GGTAATATCT TGATCGACAG AAAGAATCGC
AGCAGAGCCT TCGACACCAT GGCTCAAACG GCGAAAAAGA TAAAAGAGAA GTGTCTCTCT
ATCTGGATCT TCCCTGAAGG TACACGCTCA CGAGGCAAAG GCTTGCTACC ATTTAAATCG
GGTGCCTTTC ATACAGCGAT AGAAGCCGGG GTTGCTATGG TGCCTGTGCT TGCTTCTAAC
CAAGGCCATA TAAAACTAAA TCGCTGGAAT AATGGCGTCG TGATCATAGA GATGATGGAT
CCTATTGAAA CGAAAGGGTT AGCAAAATCT CAAGTCAAAG AGCTTTCATA CAGAATTCAT
TCGATGATGT CTGCTCGACT GACGCAACTC AACATGGAAG CTACGGCCTT AATGGCTAAG
TAA
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| Protein sequence | MLLILRSLIL AVMLLLSFVF GGLFCLIRPR HRDNVHMFAK IFSFAAPVLG IKVIVRKPEV
KTEEPCVFLA NHQNNFDMFT HTAAVPKGTV SLGKKSLAWV PFFGQIYWLS GNILIDRKNR
SRAFDTMAQT AKKIKEKCLS IWIFPEGTRS RGKGLLPFKS GAFHTAIEAG VAMVPVLASN
QGHIKLNRWN NGVVIIEMMD PIETKGLAKS QVKELSYRIH SMMSARLTQL NMEATALMAK
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