| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0542 |
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| Symbol | |
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| ID | 5612504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 662422 |
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| End bp | 663072 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931387 |
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| Product | MSHA biogenesis protein MshJ |
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| Protein accession | YP_001472282 |
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| Protein GI | 157373682 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCAGA GATGGCAAGC ATTAGGTGAG CGCTTCGATC TGTTGAGTCA ACGTGAAAGG
GTGATGGTAG CAACGGCTGC TGTCGTCGTA ATCGGTATGC TTTGCTACCT GCCGCTCGAG
TCTCTATTAC TGAAATATAA CGCCCTCTCT AAACAGATAA CGGCGATCAC TGCCGAAAAT
AAAATATCGC TGCAACAGAT CGAGCTATAT GAGCAACGCT TAGCTCAAGA TCCCAATGAT
GAGTACAATA ACCGCCTTCA GGTTCTCAAG CAGCAGAGTG CAGATCTCGA CGATCAGCTG
TCATTTCAGA TGGTCGATAT GATCCCTGCG GATCATATGC CTACCCTGTT GAGTCAGTTG
TTAGGCAAGG TAACTGGTAT AAAGTTGCAG GAGTTTAAGT CTATTGCACC GACTCCGCTC
CTGGCTCTCG ATGATGAGAA GAAAACGAAT CTATATAGCC ATGGTATCCG CCTCACATTA
GAGGGGGATT ATTTCTCATT GCTAAAGTTT ATCGAAGCCG TTGAAAGTAT GCCCAATAAG
CTCTACTGGA AACAGATGGA TTACAAGGTT GAAGAGTATC CTGGCGCTAA TGTCGTTTTG
GAACTTTACA CCATAAGTGT CAATAAGGAC TTCATCAGTG TTGCAAATTA A
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| Protein sequence | MKQRWQALGE RFDLLSQRER VMVATAAVVV IGMLCYLPLE SLLLKYNALS KQITAITAEN
KISLQQIELY EQRLAQDPND EYNNRLQVLK QQSADLDDQL SFQMVDMIPA DHMPTLLSQL
LGKVTGIKLQ EFKSIAPTPL LALDDEKKTN LYSHGIRLTL EGDYFSLLKF IEAVESMPNK
LYWKQMDYKV EEYPGANVVL ELYTISVNKD FISVAN
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