| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0541 |
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| Symbol | |
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| ID | 5612503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 661814 |
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| End bp | 662425 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931386 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001472281 |
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| Protein GI | 157373681 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATGA AGACCAGGGT TAACCTCTTT TCTGCTTCAC TTTTGCCACC GGAGCTGAGG
TTATCATTCA ATCACCTTAC TCTGGTGTTG TTGGTTTTGG TTGGCCTGTT CACCATAGCC
ATAGGCGGAA GTTATGCGTT AGTCTCGGCT CTGGAAACCG ACAAAGCAGA GTTGAATAAG
CAAAAGCGTA ACCTGGACAA TCAGAAGCAA GATCTTGAGA CTGCGCTGGC CAATCGGGCA
CCGGATTCGG CCCTTGTCGA TGAAGTCGAT CTTCTGTCTC AACAGGTGGA GCTGAAACGT
ATGCTACTCG GAGAGTTGAG TCAAAGAGAA GCATTGACCA GTCATGGTTA TTCGCCTCTG
ATGAAAGATC TCGCTCGCGT TGCCAATAGC AATATTTGGC TCAGCAGAAT CCAGGTCGAT
AATAATAGCT TTATTTTCGA AGGTTTTAGC TCCGCGCCTC ACAGCGTACC ACTTTGGGTC
GATCGCCTGA AATTAACTGA CACGCTCAAG GGGCATGCAT TTGCTTCGAT GACGATGAGT
CGTGGAGAGG GCAAGCCATT AGCATTTACC CTGACCAGCA AAGCGGGCGA TAGTGTGGAG
AATAATCAAT GA
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| Protein sequence | MTMKTRVNLF SASLLPPELR LSFNHLTLVL LVLVGLFTIA IGGSYALVSA LETDKAELNK
QKRNLDNQKQ DLETALANRA PDSALVDEVD LLSQQVELKR MLLGELSQRE ALTSHGYSPL
MKDLARVANS NIWLSRIQVD NNSFIFEGFS SAPHSVPLWV DRLKLTDTLK GHAFASMTMS
RGEGKPLAFT LTSKAGDSVE NNQ
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