| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0540 |
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| Symbol | |
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| ID | 5612502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 660903 |
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| End bp | 661817 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931385 |
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| Product | biogenesis protein MshI |
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| Protein accession | YP_001472280 |
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| Protein GI | 157373680 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGA GTCTTTTTAG CAGGTTGGCT TTCTGGCAGA AATCTAATTC AAAAATCAAA
ATAGGCATCT ATGTCTGCCC TGATAAGCTT ATTGTTTATC GGGCCATTGA TGATTCCGAA
AATTCGGATG AGCTTAAAGC TACCTATGAG TTTGTGTTCG ATGGCACCGA TTGGTCAGGG
GTCTTTGCAC TGATAGCAAA GCAATTTGCG CCTGCCCAGA TTCAGATAAC CTTGTGCTCC
GCTTTTTATC AGCTCCTGCT AGTCGATAAG CCCAATGTCG AATCTGAAGA GATGACGCAG
GCCTTGCTCT GGTCTGTTAA AGATATGGTA AGCCAGCCTG TCACCGATAT TCACCTGGAT
TACTTCGAGC CTCCATTACC GGGTCATACC AAATTAAATG TTGTGGTTGT CGAAAAGGCC
AGCTTGAGTG CCTTAGTGTT AGCCGCGAAA GATCACGATA TGGAAGTCGT GGGAATTAAT
ATTGAAGAGA TGGCTGTGAC TAACCTATTC ACCGAAGAGG CTCAGGCGCG ACTGGTATTG
AGTCATACCT CCGGTCAGGA GTTGCTGTTG ACTGTCGTCA GGCAGGGTGA GTTATTTATG
CAGCGACGTG TGAGGGGATT TAATCAGCTC GATAGTGTGA GTGCTGAAGA TCTTGCATTT
GGCCTGGCCG ATAACCTAAG CCTGGAACTA CAGAGATCCA TGGATTATTT TGAGAGCCAA
TTGCGTCAGG CTCCCGTGGC ATCGATCGAG CTATTGATTA ATGGTCATGT CGGAAAGCTT
GCCGAGCTGG TTAGCGCTAA CTTTAACCAA AAGGTTAATG CGATTGAAGT TGACTCTGTT
GAGGCTAAGA TGGCTGCTCT GGCCTTGGAT GAGTTTAATC GAGATGAGTC GGCAGAACGA
GGTATGAATT CATGA
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| Protein sequence | MGKSLFSRLA FWQKSNSKIK IGIYVCPDKL IVYRAIDDSE NSDELKATYE FVFDGTDWSG
VFALIAKQFA PAQIQITLCS AFYQLLLVDK PNVESEEMTQ ALLWSVKDMV SQPVTDIHLD
YFEPPLPGHT KLNVVVVEKA SLSALVLAAK DHDMEVVGIN IEEMAVTNLF TEEAQARLVL
SHTSGQELLL TVVRQGELFM QRRVRGFNQL DSVSAEDLAF GLADNLSLEL QRSMDYFESQ
LRQAPVASIE LLINGHVGKL AELVSANFNQ KVNAIEVDSV EAKMAALALD EFNRDESAER
GMNS
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