| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0526 |
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| Symbol | |
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| ID | 5613982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 641660 |
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| End bp | 642463 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931371 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472266 |
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| Protein GI | 157373666 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCGC AACAGAGTGG AATGGTCTGT AACAGGATCA TCGAGAGCTT TCTCGAAAAA
CTGGCACCCT TCGGTATTAA ACGGTTTTAC TATTGCATTA TTCCGGATGA ACTATCCAAT
GTTTGTATTG TGACCGATGA CCAAGCCAAT ATTCTAAACA GCGACGGTAA CGAAGAACTT
CACATCGCTA AGATGATCGA TCTGAAGAAG ATGCGTTTTG CCGTCGCCTC AGATCCGGAG
ATCTTAAAGT TCCGCGAGGA GTTTCTACAT CGTTTTGCCA GAAATGATGA AGGCTACCAA
CTCTCAGGCC CCTCAATCCG GAAAAAATAT AACCCCTATA TATGGCCGGA AAACACCATG
CCGGAGCGAC GAAAACGGAG CTTCGAGCAA CTACTAAATC TATACCAAAT ACGAACCAGA
ATTAGCTTTT ATCACCCGGT AAAAGATAAA AAAGGCTGGA TAGGGATCTG TAACCTTTTC
TCATCCGATA AGCGAGGTCA AGTTATCGAT AACATCTCAT CGACACCAGA TGAATTGGAG
ACGCTTCTCA GGGAGTTTGC CGAAACATTT AATGCCTTAG CGTTTAAGAC CATCAACCCC
ATCTCTAATT TCAGAGTACT ATCCCCTACC TGCGTAGAGA TACTCTCATT AGTCGCTCAG
GGGTGTTCGA GTGAAGAGGT AGGTAAACAA CTCTATATGA GCGAACGGGG TGTCAACTAT
CACCTGGACA GAGCAAGAGT TATTCTAACG GCCAGAAACC GGACAAACCT AGTCAGTAAG
GCCTATCAGA GTGGGTTATT ATAG
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| Protein sequence | MSAQQSGMVC NRIIESFLEK LAPFGIKRFY YCIIPDELSN VCIVTDDQAN ILNSDGNEEL
HIAKMIDLKK MRFAVASDPE ILKFREEFLH RFARNDEGYQ LSGPSIRKKY NPYIWPENTM
PERRKRSFEQ LLNLYQIRTR ISFYHPVKDK KGWIGICNLF SSDKRGQVID NISSTPDELE
TLLREFAETF NALAFKTINP ISNFRVLSPT CVEILSLVAQ GCSSEEVGKQ LYMSERGVNY
HLDRARVILT ARNRTNLVSK AYQSGLL
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