Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0499 |
Symbol | |
ID | 5613691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 613800 |
End bp | 614288 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640931344 |
Product | NosL protein |
Protein accession | YP_001472240 |
Protein GI | 157373640 |
COG category | [C] Energy production and conversion |
COG ID | [COG4314] Predicted lipoprotein involved in nitrous oxide reduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TTATTCTCAT CTTGTTGGTT ATCCCGGTTC TTTTTGCATG TAGCCGAGGT GATGCCGTTA CTAAGTCGGT AGAGGCCCAA GCTATTCATG ATCATGAGCG TTGTCACCTG TGTGGCATGA TGATAACGAA ATACCCGGGT CCTAAGGGGC AGTTACAGCT AAAAAGTGAA GAGATAGTCC CTAAGTTTTG TTCTACCAGA GATATGTTCA ACTTCTCTCT TCAGCCTGAG AATCAACGTC AGATCACCGC TCTTATGGTC CATGACATGT CGGCAACCGA CTGGGCGCAT CCGGATGATA AGCACTTTAT CGATGCGACT CAGGCCTGGT ATGTATATGG GACCAGCAGA AAAGCAGTGA TGGGACCTGC TGTCGCCTCG TTCGCCACCG AAGAGGGGGC TGTTCAATTT GCTAAAGAGT TTGGGGGAGC CGTTTTAGGC TATGAGCAGA TCACCCTCGA GCTACTTCTC GGCGAGTAA
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Protein sequence | MKKLILILLV IPVLFACSRG DAVTKSVEAQ AIHDHERCHL CGMMITKYPG PKGQLQLKSE EIVPKFCSTR DMFNFSLQPE NQRQITALMV HDMSATDWAH PDDKHFIDAT QAWYVYGTSR KAVMGPAVAS FATEEGAVQF AKEFGGAVLG YEQITLELLL GE
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