| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0354 |
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| Symbol | |
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| ID | 5612635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 414104 |
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| End bp | 414796 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640931186 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472095 |
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| Protein GI | 157373495 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0313675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC TAGAACGAGA GTCACGATTA TTAGAGGTCG CAAGAGAGCT AATTCTTGAA
CATGGAATGA TGTCGTTTAA GTTCACTGAC ATTGCTAAAC GTGCGGAGGT GTCTCGAGCA
ACCTTATATA AATATTTTTC TGGTAAAGAA GATGTTTTAG TAAGCTTATT TGTCAGTGAT
GCAGGCAATA CTTTGCAGAT GTTACTAGAT ATTCAGGCCG ATGAAATCTT AAACGATAGA
GAGAAAATTT TACTCAGTTT ATTGGCTCCT GTTGCGAGCT CAATGGAGGC GCTGAATCGT
TCTGGTACGC TATTGCTCAG TGCTAATCCC GGTATATTTA TGTTCGCTGG TGAAGCGCAT
CAAGCTAAGC TTGAGCAGAT AGTTGCTCAG ATCAGAGGGA TCGTTTTAGA GTTTTGGGTT
ATACCTTTTA AACAAGGTCA TATGAGAGTC ACTCAAGAGC AACTGGAGGA GGTCATGGCA
TCGACATTTC CTTATCAAAG AGGATGCGTC ACCATTCCTC AAAATGTCAT GACTGTGGGT
AAGCAGATCA ATTACCCTCT GAAAAAAGTT TTCGAAAACC TATTAAAGTT AACAGAGGCA
TTAGATTGGT GTGAAGAGCA TGCTAATGTC GATTATGAGA AAACTTTGAT TGGTATAGGA
AGGCACAAGA GAAACGAGAT GATTGCATAT TAG
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| Protein sequence | MSKLERESRL LEVARELILE HGMMSFKFTD IAKRAEVSRA TLYKYFSGKE DVLVSLFVSD
AGNTLQMLLD IQADEILNDR EKILLSLLAP VASSMEALNR SGTLLLSANP GIFMFAGEAH
QAKLEQIVAQ IRGIVLEFWV IPFKQGHMRV TQEQLEEVMA STFPYQRGCV TIPQNVMTVG
KQINYPLKKV FENLLKLTEA LDWCEEHANV DYEKTLIGIG RHKRNEMIAY
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