| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0348 |
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| Symbol | |
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| ID | 5610809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 404461 |
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| End bp | 405120 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931180 |
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| Product | cytoplasmic chaperone TorD family protein |
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| Protein accession | YP_001472089 |
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| Protein GI | 157373489 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.424165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCC TTACCGAAAA TGAGCTCCTG GAATATCAAG GCATTGCACG TATTCTTCAC
AATGTACTCT TTAACGACCC GACACCTGAG TTGATCCAGA GTTTTATCGA ACACGATGTT
GCTCAGAGCT GGCCTGAGTT TACAGGTTCG GCCCGGGAGT CGAGTGGTCG CGAGTTGCTG
TCCAATTATC TCGGCCAATG GACTACAGAC AAACAACAAG CCCTGAAGTT GGACTATGCA
CAACTCTTCT ATGGTCCCGG CGAGCCTAAT GCTGTGCCTT GGGGATCGGT CTACCTGAGC
GAGAGACAAC TCCTCAATGA CAAGACGACT CTGGCACTGA AAGCATTTTA CCAAGAGCAA
GGGATCAGCT TCGAGCTGGA TACCAATCAA CCCGTGGACC ATATCGGCCT GTTTTTCGCC
GTATTGGATC AGCTGCTAAC CCAATGGGCT CAGACTGAAG ATAGTGAAGC GATAGAGCGC
AGCTGCATGA TACTGCTACA GCAACACCTG CTTCCATGGT CTGGTCGTTG CCTCGAACTC
ATGACTGAAC ATGCCAAAAC CGACTTTTAT CGCGGTATAG CATTGCTGAC CCAAGCCTAT
TTAGAGGGGC TGATCCAAAG ATTAAACCTG GTCCCTATGA CAACGCGCCT GTATCGTTAA
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| Protein sequence | MSSLTENELL EYQGIARILH NVLFNDPTPE LIQSFIEHDV AQSWPEFTGS ARESSGRELL
SNYLGQWTTD KQQALKLDYA QLFYGPGEPN AVPWGSVYLS ERQLLNDKTT LALKAFYQEQ
GISFELDTNQ PVDHIGLFFA VLDQLLTQWA QTEDSEAIER SCMILLQQHL LPWSGRCLEL
MTEHAKTDFY RGIALLTQAY LEGLIQRLNL VPMTTRLYR
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