| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0265 |
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| Symbol | |
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| ID | 5610488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 299126 |
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| End bp | 299590 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931091 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001472006 |
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| Protein GI | 157373406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.13438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0255655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTCATA TCGCACTCTT TGAGCCAGAA ATCGCTCCCA ACACAGGTAA TATTATTCGT
CTCTGCGCCA ACAACGGCTG CCAGTTACAC CTGATAGAGC CCATGGGCTT CGATCTGGAA
GAGAAGAAGC TTCGCCGTGC GGGGCTCGAT TACAGCGACC TTACCCGAGT GACCCGCCAC
AAAGATTTTG AGAGTTTTCT GGCGGCAATG GATGGCAAGC GGATCATGGC ATGTACCACC
AAGGGCAGCA GGCCCCATAC AGAGCTCGCT TATGAGAAAG AGGATGTACT GCTATTCGGG
CCTGAAACTC GCGGGCTGCC GATAGAGATC ATCGAGTCTC TTCCAACGAC CCAGCGTCTG
AAAATCCCGA TGACGGCAAA TAGCCGCAGC CTTAATCTGT CAAATGCCGT GGCTATCATC
AGTTATGAGG CATGGAGACA AATTGGTTTC GAAGGGGCAG TATAA
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| Protein sequence | MFHIALFEPE IAPNTGNIIR LCANNGCQLH LIEPMGFDLE EKKLRRAGLD YSDLTRVTRH
KDFESFLAAM DGKRIMACTT KGSRPHTELA YEKEDVLLFG PETRGLPIEI IESLPTTQRL
KIPMTANSRS LNLSNAVAII SYEAWRQIGF EGAV
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