| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0191 |
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| Symbol | |
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| ID | 5611748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 218712 |
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| End bp | 219698 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931017 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_001471932 |
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| Protein GI | 157373332 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TGTCCCATTT TTTAAAAGTC ACCATCGTTT TTACTCTCTG CGTTATTCTG
ATGGGAGCCT ATACAAGGCT TTCCGATGCG GGGCTGGGTT GTCCGGACTG GCCCGGCTGT
TACGGCATGA TCAAAGTCCC AAGCCAAGAT CACGAGTTGG CTCTGGCATT AGATTCATTT
CCGGAGCATA AAGTTGAACA GGAGAAAGCT TGGCTCGAGA TGATCCACAG ATATATCGCC
GGCACACTCG GGTTGTTAGT GCTCATGATC TTGTTTATCT GCCTTAAAAA CAGAGAAACA
CCCAAGAAAC TGCCAACATT CATAGCTCTG CTTATCTTGT TTCAGGCAGC TTTGGGAATG
TGGACGGTCA CGATGAAGTT AATGCCTGTG GTTGTCATGT CCCACCTTAT TGGTGGCTTC
ACGTTAATAT CGCTCTTGCT CCTGCTCTAT TTACGAACAA AACCCTTAAG GATCCCGGGG
GGAGATCATA GTGCAAGAAA ATTGGCTCCC CTTGCAACTG CAGCATTAAG CGTACTGATG
CTACAGATAA TTCTCGGTGG CTGGACCTCA TCGAACTATG CCGCACTGGC CTGCACTTCT
TTACCTATCT GCGAGGGAGA CTGGTATAAC AAATTACGTT TTATTCAGGC GTTCACTCCT
TTCCAGGGAA CCCATGACAG CTATGAGTTT GGGGTACTGG ATTACGCCTC CCGAATGACA
ATCCATGTCA CTCATAGATT CGGCGCCTTA GTGACAGCAG CAGTATTGCT GTGGTTAGCC
TATAAATTAC ATACACAGTC TCAATCATCA CAGTTAAAAC GGTCCGCCCA ATTGTTATTT
CTACTGGTCT GTCTGCAAGT CGGACTGGGG ATCAGTAATG TTGTATTGCA CCTGCCATTG
GGGATCGCCG TATCCCACAA TGCAGGTGCC GTGTTCTTGC TCATGAATCT CGTTTTTATT
AACTATTGCT TATGGCGCAA AGCCTGA
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| Protein sequence | MKNLSHFLKV TIVFTLCVIL MGAYTRLSDA GLGCPDWPGC YGMIKVPSQD HELALALDSF
PEHKVEQEKA WLEMIHRYIA GTLGLLVLMI LFICLKNRET PKKLPTFIAL LILFQAALGM
WTVTMKLMPV VVMSHLIGGF TLISLLLLLY LRTKPLRIPG GDHSARKLAP LATAALSVLM
LQIILGGWTS SNYAALACTS LPICEGDWYN KLRFIQAFTP FQGTHDSYEF GVLDYASRMT
IHVTHRFGAL VTAAVLLWLA YKLHTQSQSS QLKRSAQLLF LLVCLQVGLG ISNVVLHLPL
GIAVSHNAGA VFLLMNLVFI NYCLWRKA
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