| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0174 |
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| Symbol | |
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| ID | 5614112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 198309 |
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| End bp | 200321 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931000 |
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| Product | sulfatase |
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| Protein accession | YP_001471915 |
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| Protein GI | 157373315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCTC GCTTTTCTAT TTTGGGTCCA TTTAGATCCA TTTTATGTTT TTGTTTGATC
GCATTACTTA TTGTTACTCT TAGCCGTATC GGATTAGGTT TCTGGCAATT CGATCGAGTC
GTTGCCGTTG GTGGTTGGTC CCATCTGATT ATCCAGGGTC TTAGGGTCGA TCTGGCCACC
CTATGTTGGT TGTGGGGCAT TGCGGCTCTG GGAACGGCGA TATTTTCCGG TGATCATGCT
CTGGGTCGCA CCTGGAACTC TCTGTTAAGA GTCTGGTTAA CGCTTGGACT TTGGTTGATG
CTATTTCTCG AAGCCTCTAC CCCCTCATTT ATTCAAGAGT ATGGAATAAG ACCAAACCGA
CTCTATATCG AGTACCTTAT CTATCCCAAA GAGGTGCTTT CGATGCTGTG GGCCGGGCGT
AAAATCGAGC TGATTTTCGC TGCCTTGTTG AGCTTGACGA CCCTTTGGGG CGGATGGAAG
TTGAGTGGCA GCCTGCTGAA AAATATTCGT TATCCACGTT GGTTCTTTCG CCCGTTTATT
GCGCTGCTGG TGATCGCCGT GACTCTGATG GGCGCCCGCT CCAGCTTGGG TCACAGGCCT
TTAAACCCTG CAATGGTCGC TTTTGCCGAC GATCCTCTGG TTAACTCTCT GGTGACCAAC
TCCTCTTACT CTCTGTTCTT CGCTATCAGC CAGATGAAGA GTGAAGCCAG TGCGGCCAAA
ATGTACGGCA GCATGGATGA AGAGCAAGTG ATCGATACGG TACGCAGGGA AAGTGGCAGA
GAGCTTGCTG CATTCACATC GGAAGCGATC CCTAGCCTCT CTTTTAACCC TGCAAGCTAT
CAAGGTAAAC CTAAGAACCT GGTTATTATT TTACAGGAGA GCTTAGGGGC GCGATTTGTG
GGTAATTTAG GTGGCTTACC TCTGACACCC AATATTGATG AGCTGTCAAA AGAGGGCTGG
GCTTTCGAAA ATCTCTATGC CACTGGTACA CGTTCCGTTC GTGGAATCGA GGCGGTTACG
ACAGGTTTTA CCCCGACACC GGCTCGTTCG GTCGTTAAGT TAGGTAAGAG TCAGCATGGT
TTTTTCTCGA TTGCGGCACT GTTAAAGCAG CATGGTTATG AGACTCAGTT TGTCTATGGT
GGTGAGAGTC ATTTCGATAA TATGAAGAGT TTCTTCCTCG GCAATGGCTT CAGTAATATT
GTCGATGAAA ACGATTACAA AAATCCTGCA TTTACCGGCT CATGGGGGGT TTCGGATGAA
GATCTGATGA GAAGGGCGAA CAGTGAATTT GAGCAATTTC ACAAGCAAGG TAAGCCATTT
TTCAGTTTAG TGTTTAGTTC GAGTAATCAT GATCCTTTCG AGTTTCCCGA TGACAGAATT
GAGCTCTATG AACAGCCTAA GCAGACGCGC AATAATGCGG CAAAGTATGC CGATCATGCG
GTCGGCGAGT TTTTCAAACT AGCGAAGCAG TCTGACTACT GGAAAGATAC GCTATTTTTG
ATCGTTGCCG ATCATGACAG CAGAGTGGGT GGGTCCAGTC TGGTGCCTAT CTCCCGGTTC
AGGATCCCCG GAATAATCGT CGGCGATGGT GTAGAAGCTA AACGGGATCA GAGAGTGGTG
AGTCAGATAG ATCTCGCACC CACCTTGCTC TCTATGATGG GGATATCGGA TAGCTATCCT
ATGCTTGGCC AAGATTTGAC ACGAGTCAGT GACGACTGGC CGGGTCGTGC CTTGATGCAA
TATGATAAGA ATATGGCCTA TCTTCGCGGC GATGATGTCG TAGTATTGCA ACCCGAAAGG
GAGCCTAGCG GGTTTAAATA TGATTTTCTT GCAGAGACAC TGGTTGCAAA GCCACAGAGT
GAAGAGATGA AACAGGTTGC TTTGGCTTGG GCGCTGTGGG GAAGTTTAGC CTATCAGAAG
GGCTTATATC GCCCCCAGGA TGAGGTTGTG CAGCGTGATG GTTTGGTTTC AGCTGAGGCG
ACACTTAAAT CAGCGGAAGT TACACTTAAA TAA
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| Protein sequence | MASRFSILGP FRSILCFCLI ALLIVTLSRI GLGFWQFDRV VAVGGWSHLI IQGLRVDLAT
LCWLWGIAAL GTAIFSGDHA LGRTWNSLLR VWLTLGLWLM LFLEASTPSF IQEYGIRPNR
LYIEYLIYPK EVLSMLWAGR KIELIFAALL SLTTLWGGWK LSGSLLKNIR YPRWFFRPFI
ALLVIAVTLM GARSSLGHRP LNPAMVAFAD DPLVNSLVTN SSYSLFFAIS QMKSEASAAK
MYGSMDEEQV IDTVRRESGR ELAAFTSEAI PSLSFNPASY QGKPKNLVII LQESLGARFV
GNLGGLPLTP NIDELSKEGW AFENLYATGT RSVRGIEAVT TGFTPTPARS VVKLGKSQHG
FFSIAALLKQ HGYETQFVYG GESHFDNMKS FFLGNGFSNI VDENDYKNPA FTGSWGVSDE
DLMRRANSEF EQFHKQGKPF FSLVFSSSNH DPFEFPDDRI ELYEQPKQTR NNAAKYADHA
VGEFFKLAKQ SDYWKDTLFL IVADHDSRVG GSSLVPISRF RIPGIIVGDG VEAKRDQRVV
SQIDLAPTLL SMMGISDSYP MLGQDLTRVS DDWPGRALMQ YDKNMAYLRG DDVVVLQPER
EPSGFKYDFL AETLVAKPQS EEMKQVALAW ALWGSLAYQK GLYRPQDEVV QRDGLVSAEA
TLKSAEVTLK
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