Gene Sros_8905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8905 
Symbol 
ID8672243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9833600 
End bp9835969 
Gene Length2370 bp 
Protein Length789 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003344280 
Protein GI271970084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.826763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG AGTTCACCGA GTGGCTGCGC GACCGGAGCG ATGACCAGTT GCGGGCTCTC 
GTCGCCGTGC GACCCGAGCT CATCACCCCG GTCCCGGCAC ACCTGGAAGG GCTGGCCTCG
CGGGCGGGCA GCCCGTCGGC GATCGGTCGC GTGCTCGACC GGCTCGACCT GTTCACGCTC
TCGGTCATCG AGACGCTGGC CGTGCTCCCG TCGCCGGTCG CCCACCGGAC GCTGCGCGCC
CAGATGGCCC GCGCGCTGCA GGGCCCGGCG GACCCGGCTT TCCAGGCCGC GCTCAGGGAG
ACGGTCGAGC GGCTGCGGAC CCTGGCCCTG GTCTACGGGC CCGACAAGGC GCTGGCTCCG
GCCCCCGGCG TGCGGGAGGT CCTCGAAGCG CCCGCCGGGC TCGGCCCGCC GGCGGTGGAG
GTGTTCAGGC ACCATCCCGC CGAGCGCCTG GCCGAGCTGG TCCACGACGT CGGCGGCGCC
GGCGACGGCA CCAAGGAGAC CCTCGCCCGG CTGCTCGGCG ACCCGGAAAT CGTCGGACGG
CTGATCCAGG AGGTCTCGCC GCAGGCCCGG TCCGCGCTCA ACGAGCTGGC GTGGGGGCCC
GCAAGCGGCC GGGTGCCCAA CGCGCGCCGG GAGGTGCGGG CCGCCACCGC CCAGTCGCCG
ATCGAGCAGC TGCTCTCCCG CGCGCTGCTC GGCGCCACCG GCGAGGAGAC CGTCGTCCTG
CCCCGCGAGG TCGCCCTGGC CCTGCGCGGC GGCCGGATCC ACCGGGACCT CTCCCCCGTC
CCTCCCGCGC TCGACGGCGC CGTGCGCGAC CCGGGGCTCA CCGACCGCAC GGCCGCCGGG
CAGGCGTTCG CGTTCACCCG CGCGGTGGAG GAGCTGTGCG AACGCTGGAG CGTCGACCCT
CCCGGCGTGC TCCGCAGCGG CGGCCTGGCC GTACGCGACC TGAAGCGGAC CTCGGGCCTG
CTCGACCTGC CCGAGTGGGT CACGGGTCTG GTCGTCGAGG TGGCGCACGC GGCCGGGCTG
GTGGCCGCCA GCGGCGCGGT GGACGGCGAA TGGCTGCCCA CGCCGGCCTA TGACGGCTGG
CGGGTGAAGG GCACCGAGGA CCGCTGGACG GTCCTGGCCA CGACCTGGCT CACCATGGAC
CGGGTGCCCG GGGTGATCGG CGAGCGTGAC GAGCGCGACC GCCTGCTCAA CGCCCTCCAC
CCCGACCTGC GCCGCTCGGC CGCCGCCGAG GTCCGCACCA CCACCCTGGG CATGCTCGCC
GTCGCCGGTC CCGGCCTGGC CCCCACCCTG GAGTCGGTGC GCGAGCGCCT GGCCTGGGAG
CAGCCCCGCC GGCGCGGCGG CCACCGCGAC CAGCTGGTGG AGTTCACGCT GCGCGAGGCG
GAGCAGATCG GGGTGACCGG CCTCGGCGCG ATCGTGGACC ACGGCCGCGC CCTGCTCCCC
GGCTGCGACC GCACGATGTC GGCGGGCCGC CTCCTGGCCC CGCTGCTGCC CGAGCCGCTC
GACCACGTCC TCCTTCAGGC CGACCTGACC GCCGTGGCCC CCGGACCGCT CACCAGCGAC
CTGAGGCGGT GGCTGGCGCT GGCGGCCGAG GTGGAGTCCA CCGGCGGCGC AACGGTCTAC
CGGTTCGACG AGCGGTCGAT CCGGCGGGCG CTGGACGCGG GGCAGAGCGC CGACGAGATG
CTGGCCATGC TGGAGCGGCA CTCCACCACG CCGGTCCCGC AGCCGCTCGG CTACCTGGTC
ACGGACGTGG CCCGCCGCCA CGGCCGGATG CGCGTCGGTA CGGCGAGCGC CTACGTGCGG
TGCGACGACC CCTCGCTGCT GGACGAGGTG ATGGCCGACC GGCGTGCCCT CCCGCTGCGG
CTGCGCCGGC TCGCCCCCAC CGTGATCGCC TCCAAGACCT CCCGTCCGAC CCTGGTCGAC
TCGCTGCGCG CGATGGGCTA CGCCCCGGCC TCCGAGTCCC TGGACGGCGA CGTGATCATC
ACCCAGCTCG ACGTCCGCAG GACCGACGGC CAGCCCCTCG TCCGTTCCTC GGCCACGTTC
AACGGCCTGG AGGCCGACGT CGTGGCGGCG GCCGTACGCG CCGTCCGCGC GGGCGACGCC
GCGCACCGGG CACGCCGGGC GCCCGTGGAC GCCCCCGGCG GCCAGGTCCC GCGTTCCCCC
GCGACCGCCA CCATCGTCGC GCTGCGCGAG GCCATCCGGC AGGGCTCCCA GGTCTGGATC
GGCTACCTCG ACTCCCAGGG CAACGCCACC AGCCGGATCC TGGAGCCCGC CCGGATGGAG
GGCGGCTATC TCACCGCCTA CGACGAGACC CGGGCGGCGG TGCACCGCTT CGCCCTGCAC
CGCATCACCG GCATCGCCGA CATCAACTGA
 
Protein sequence
MSTEFTEWLR DRSDDQLRAL VAVRPELITP VPAHLEGLAS RAGSPSAIGR VLDRLDLFTL 
SVIETLAVLP SPVAHRTLRA QMARALQGPA DPAFQAALRE TVERLRTLAL VYGPDKALAP
APGVREVLEA PAGLGPPAVE VFRHHPAERL AELVHDVGGA GDGTKETLAR LLGDPEIVGR
LIQEVSPQAR SALNELAWGP ASGRVPNARR EVRAATAQSP IEQLLSRALL GATGEETVVL
PREVALALRG GRIHRDLSPV PPALDGAVRD PGLTDRTAAG QAFAFTRAVE ELCERWSVDP
PGVLRSGGLA VRDLKRTSGL LDLPEWVTGL VVEVAHAAGL VAASGAVDGE WLPTPAYDGW
RVKGTEDRWT VLATTWLTMD RVPGVIGERD ERDRLLNALH PDLRRSAAAE VRTTTLGMLA
VAGPGLAPTL ESVRERLAWE QPRRRGGHRD QLVEFTLREA EQIGVTGLGA IVDHGRALLP
GCDRTMSAGR LLAPLLPEPL DHVLLQADLT AVAPGPLTSD LRRWLALAAE VESTGGATVY
RFDERSIRRA LDAGQSADEM LAMLERHSTT PVPQPLGYLV TDVARRHGRM RVGTASAYVR
CDDPSLLDEV MADRRALPLR LRRLAPTVIA SKTSRPTLVD SLRAMGYAPA SESLDGDVII
TQLDVRRTDG QPLVRSSATF NGLEADVVAA AVRAVRAGDA AHRARRAPVD APGGQVPRSP
ATATIVALRE AIRQGSQVWI GYLDSQGNAT SRILEPARME GGYLTAYDET RAAVHRFALH
RITGIADIN