Gene Sros_8457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8457 
Symbol 
ID8671791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9330548 
End bp9332476 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content69% 
IMG OID 
Productsuccinate dehydrogenase flavoprotein subunit 
Protein accessionYP_003343844 
Protein GI271969648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA AATACACCGA AGGCGCGCCG ATCCGCGACA CCAAGGCTCC GGAGGGTCCG 
ATCGAGGACC GCTGGGAGAA GCGGAAGTTC AGCGCCAAAC TGGTCAACCC GGCCAACAAG
CGCAAGCTCA ACGTCATCGT CATCGGCACC GGCCTCGCGG GCGGCTCGGC CGCCGCGACC
CTCGGCGAGC TGGGCTACAA CGTCAAGTCG TTCTGCTACC AGGACTCGCC CCGGCGCGCG
CACTCCATCG CGGCCCAGGG CGGCATCAAC GCCGCCAAGA ACTACCGCGG TGACGGCGAC
TCGATCTACC GGCTGTTCTA CGACACGGTC AAGGGCGGCG ACTTCCGCGC CCGCGAGTCG
AACGTCTACC GGCTCGCCCA GGTCAGCGTG AACATCATCG ACCAGGCCGT GGCCCAGGGC
GTGCCGTTCG CCCGCGAGTA CGGCGGCCTG CTCGACACCC GATCCTTCGG CGGCGCGCAG
GTCTCCCGGA CCTTCTACGC CCGGGGCCAG ACGGGGCAGC AGCTGCTGCT CGGCGCCTAC
CAGGCGCTGG AGCGGCAGAT CGCGGCCGGG ACCGTGGAGA TGCACACCCG CCACGAGATG
CTCGACCTGA TCATCTCCGA CGGCCGGGCG CGCGGCGTCA TCGTCCGCGA CATGGTCACC
GGCGAGATCG AGCGGCACCT GGCCGACGCG GTCGTGCTGG CCAGTGGCGG CTACGGCAAC
GTGTTCTTCC TGTCCACCAA CGCCAAGGGC TGCAACACCA CGGCGATCTG GCGGGCGCAC
CGGCGCGGCG CGATGTTCGC CAACCCCTGC TACACCCAGA TCCACCCGAC CTGCATCCCG
GTCAGCGGCG ACTACCAGTC CAAGCTGACC CTGATGTCGG AGTCGCTGCG CAACGACGGC
CGCGTGTGGG TGCCGGTCAA GGCGGGCGAC GACCGGCCCG TCTCGCAGAT CCCCGAGGAC
GAGCGCGACT ACTACCTGGA GCGCATCTAC CCCGCGTTCG GCAACCTGGT CCCGCGTGAC
ATCGCCTCCC GCGCCGCCAA GAACGTCTGC GACGAGGGCC GCGGCGTCGG CCCCGGCGGT
CTGGGCGTCT ACCTCGACTT CGCCGACGCG ATCCGCCGCC TGGGCCGCGA CGCGGTGGAG
AAGAAGTACG GCAACCTCTT CGAGATGTAC GAGCGCATCA CCGGCGAGGA CCCCTACACC
CAGCCGATGC GCATCTACCC CGCCGTGCAC TACACGATGG GCGGGCTGTG GGTGGACTAC
GACCTGCAGT CCACGATCCC CGGCCTGTTC GTGATCGGCG AGGCCAACTT CTCCGACCAC
GGCGCCAACC GCCTCGGCGC GTCCGCGCTG ATGCAGGGCC TGGCCGACGG CTACTTCGTG
CTGCCGACCA CGATCGGCGA CTACCTCGCC AACGGTCCCT ACGGGGAGGT CGACGAGGAG
GCCGTGGCCG AGGCCGAGAT CGCGGTCCGC GAGAAGATCA ACAGGCTGCT GTCGAACAAC
GGCGACCGCA CCGCCGACTC CTACCACCGC GAGCTGGGCA AGCTCATGTG GGACTACTGC
GGCATGGAGC GCACCGAGGA GTCGCTGCGC AAGGCGCTGG AGCGGATTCC GGAGCTCCGA
GAGGAGTTCT GGAAGAACGT GAAGGTGTCC GGCGAGGCCG ACGAGCTCAA CCAGGCGCTG
GAGCGGGCCG GCCGGGTGGC CGACTTCTTC GACCTGGCCG AGCTCATGTG CATCGACGCG
CTGCACCGCA CCGAGTCGTG CGGCGGCCAC TTCCGCGCCG AGTCGCAGGA CGCCGACGGC
GAGGCCCTGC GCGACGACGA CAACTTCGCC TACGTCGCGG CCTGGGAGTA CGGCGAGCAG
GGCCCGGTCC TGCACAAGGA AGACCTCGAC TACGAGTACG TGAAGATGAG CCAGCGGAGC
TACAAGTGA
 
Protein sequence
MTTKYTEGAP IRDTKAPEGP IEDRWEKRKF SAKLVNPANK RKLNVIVIGT GLAGGSAAAT 
LGELGYNVKS FCYQDSPRRA HSIAAQGGIN AAKNYRGDGD SIYRLFYDTV KGGDFRARES
NVYRLAQVSV NIIDQAVAQG VPFAREYGGL LDTRSFGGAQ VSRTFYARGQ TGQQLLLGAY
QALERQIAAG TVEMHTRHEM LDLIISDGRA RGVIVRDMVT GEIERHLADA VVLASGGYGN
VFFLSTNAKG CNTTAIWRAH RRGAMFANPC YTQIHPTCIP VSGDYQSKLT LMSESLRNDG
RVWVPVKAGD DRPVSQIPED ERDYYLERIY PAFGNLVPRD IASRAAKNVC DEGRGVGPGG
LGVYLDFADA IRRLGRDAVE KKYGNLFEMY ERITGEDPYT QPMRIYPAVH YTMGGLWVDY
DLQSTIPGLF VIGEANFSDH GANRLGASAL MQGLADGYFV LPTTIGDYLA NGPYGEVDEE
AVAEAEIAVR EKINRLLSNN GDRTADSYHR ELGKLMWDYC GMERTEESLR KALERIPELR
EEFWKNVKVS GEADELNQAL ERAGRVADFF DLAELMCIDA LHRTESCGGH FRAESQDADG
EALRDDDNFA YVAAWEYGEQ GPVLHKEDLD YEYVKMSQRS YK