| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8414 |
|---|
| Symbol | |
|---|
| ID | 8671748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9286469 |
|---|
| End bp | 9287494 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | putative sigma E regulatory protein, MucB/RseB |
|---|
| Protein accession | YP_003343802 |
|---|
| Protein GI | 271969606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.208354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGGC TGCCCGCCAC CCTCGTTCTC GCCGCTGTCA TGCTGCTGGG GCTGGTGGCG
GGCAGTCCGG CGCACGCCGC CCGGCCGGAC GAGCCCGAGG GCGACGACAC CGGTCTGCAC
CTGCTGCGCG AGGCGGCGAT CGCGGGCCGT ACCCGCGGAT ACTCCGGCAC CCAGTACGTC
ACCACCTGGG GCCGCTCCGG CTCCGGCGCC GTCTCCTCGG TGCTGGAGGT CCGCAACGTC
CCCGGTGAGG GGCTGACCGT GCACACCCAG CCGTCGGGTC TCGTCCAGAG GGTGGACCCC
GGCACCCCCG CCGGCGGCAT GTCCACCCCG TCCGAGACCA TGCTTGAGGT GCTGGCCCGC
AACTACCGGG TCGTGGTCGT GGGCGAGGGG CGCGTCTGCG GCCGGCCGGC CCGCCTGGTC
CACGCGGTGC GCGCGGACGG CACGGTCGCG GCCCGTTACT GGCTCGACGA GGCCGGAGGG
CCGGTGCTGC GCCGCGAGCT CCTCGACGGT CACGGCAGGG TCGTCCACGC CGGGGCCTTC
GTCGACCTGA CCCTCGGACC GGCGCGGAAG GCCGCCGCTC CCGTGTCGGC CGCCGGCGGT
CTCGACCTGG GGGAGACGCC CGGACTGCTG GCCCGGGGCT GGCGTTTCCC CGCCGCTCTG
CCCGGTCGTC TGGAGCTGTT CGCCGCGCAC GACGCATCTC CTGGATACTT GTATCTGGGA
TATTCGGATG GCTTGTCAGT CGTGTCCGTT TTTGTCCAGC CTGGTGTCCT TGATGAGGAA
CGTCTCCAGG GGTGGCATGC TCGGCAACGC AACGGGCATA CGATCTGGAT CCGGGACTCA
GCCGAGCAGG AGACGATCTG GGCGAGTGGG GGTCATGTCT ACACCGTCTT CGCGGACGCT
CCGGCCGACA TGGTCGACGC CGCCGTCGCG GCGCTGCCGC ACGAGCCGGT GCCCGCGCCC
GACCTGTGGA CGCGGCTCGG CCGAGGGGCG GATCGCCTCC TGTCCTGGGT CAACCCCTTC
GGGTAA
|
|---|
| Protein sequence | MIRLPATLVL AAVMLLGLVA GSPAHAARPD EPEGDDTGLH LLREAAIAGR TRGYSGTQYV
TTWGRSGSGA VSSVLEVRNV PGEGLTVHTQ PSGLVQRVDP GTPAGGMSTP SETMLEVLAR
NYRVVVVGEG RVCGRPARLV HAVRADGTVA ARYWLDEAGG PVLRRELLDG HGRVVHAGAF
VDLTLGPARK AAAPVSAAGG LDLGETPGLL ARGWRFPAAL PGRLELFAAH DASPGYLYLG
YSDGLSVVSV FVQPGVLDEE RLQGWHARQR NGHTIWIRDS AEQETIWASG GHVYTVFADA
PADMVDAAVA ALPHEPVPAP DLWTRLGRGA DRLLSWVNPF G
|
|---|
| |