Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8249 |
Symbol | |
ID | 8671577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9104748 |
End bp | 9109253 |
Gene Length | 4506 bp |
Protein Length | 1501 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | Polyketide synthase modules and related protein- like protein |
Protein accession | YP_003343641 |
Protein GI | 271969445 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00620759 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCGTCG CGATCGTGGG ATTGGCCTGC ACCTATCCGG ACGCGCCCGA TCCGGGGGCA CTGTGGGAGG CGGTGGTGTC GCGGCGGCGG GCGTTCCGGC GCCTGCCGGT CGAACGGCTG GACCTGGCCG ACCACCACTC CCCCGACCGG TCGGCCCCCG ACCGGACCCA CAGCACCCGT GCCGCCCTGA TCGAGGGCTG GGAGTTCGAC CGGGCCGCCT TCGGCGTCCC CGACCCGGTC CACCGCGTCA CCGACCCGGC CCACTGGCTG GCCCTGGACA CCGCGTCCCG CGCCCTGGCG GACGCGGGCT CGCCCGGCGG GGAGGGGCTC GACCGGGACC GGGTCGCGGT GGTCGTCGGC GACACCCTGA CCGGCGAGGT CGCCCGGACC TCCGCGCTCC GGCTGCGCTG GCCGTACGTG CGGCGCGTGC TGTCCTCGGC CCTGGCCGAG CTCCCCGAGG AGACGACCGC CCGGCTGCTG GCCCAGGCGG AGGCCGAGTA TCTGCGGCCG CTGCCCGAGA TCTCCGGGGA GAGCCTGGCC GGCACGGTCG CCGCGCGCAT CTGCAACCAC TTCGACCTGC GCGGCGGCGG ATACACGGTG AACGGCGGAT GCGCCTCGTC CCTGCTGGCG GTGATCACCG CCTGCCGTTC GCTGCTGGAC GGAAGCGTGG ACTTCGCGCT GGCCGGAGGC GTGGACCTCG GCCTCGACCC GTTCGAGCTG GTCGGCCTCG CCAAGGCGGG CGCGCTGGCC GGCGAGCGCA TGCGGATCTA CGACACCCGG TCGGACGGCT TCTGGCCGGG TGAGGGCTGC GGGATCGTCG CCCTGGCGCG TACGGCCGAC GCCCGCGCCG CCGGGCTCCG GATCCACGCG GAGATCACCG GCTGGGGCGT GTCCTGCGAC GGCGGGGACG GCGTCGCCCG CCCCGGCGCC GACGCCCGCC CCGAGGCCGA CGGCCGACTC CTGGCCCTGC GCCGCGCCTA CGCGCACGCG CGTGTCTCCC CCGCCGCCGT CGCCCTGTTC GAGGGCGCCG GCGCCGGCGA CGACACCGTC GAGCTCACCG CACTCACCCG CCTGCTGGCG GATGCCGCGC GCCTGTCCGA CGCCGCGCGG CGGGCGGTGA CCGGATCCGG CGCACCGGGC CGGGCGGCCA CCGGGCCCGG CGCCGTGCGG GGGGCGGCGA TCGGTTCCGT CAGCGCCAAC ATCGGGCACA CCGGGGCGGC CGCCGGAGTC GCGGGACTGA TCAAGGCCAC CCTGGGCATC GCCTCCGGCG TCCTGCCCCC GACCACCGGC TGCGGATCCC CGCACCCCCT GCTGACCGCC CCCGGCGCCC CCCTGCGGGT CCTGGCCGTC CCCGAACCGT GGCCCGCCGG GCCCCGCCAC GCGGGGGTGA GCGCCACGGG GTCCGGCGGC GTCAACGCCC ACCTCGTCCT GACCGCCCCG GTGCCGACCG GCGGGGACAG CCGCCCCACC ACGCCGGAGG CCGTACCGGG AGCAGCTCCG CGACGGCGGG TGACCGACGG GCCCTCGCGG GAGGAGCCGG TGGTGTTCGC GTTCTCGGGT GAGGGTCTGG AAGCCGTGCG GCCGGTGCTG GAGCGGGTCG CGGACCAGGC GGCGCGGTGG TCGGAGGCAG AGCTGTGCGA TCTCGCGTAC GCGCTGGGGA CCGTTCCCGC CGGGCCGTCG CGGATCGCGA TCGTGGCGGG GTCGGCGGAA CAGCTCGCCG AGCGGGCCGC TCTCGCCCTG GACTGGCTGG ACGGCGCCCA GTCCGGCCTG CCGGCCACCC TGCCGGGGGT GTATCTCGGA CCGGACGCGC AGGACGGAAC GGCGCCGCCC TCTCCCGCGG GGGTCCCCTC GGCCGAGGCC GCCGCCGCCC TCTGGGCCGC CATGGCCATC CCGGATCTCA CCGCCCTCTA CGGTGATCAT CCGGCCCGGC CCGTCGACAT CTGGCGCGAC CGCGTCTTCA TCTCCGGCCC CTGCCCGGCC GTCCCGTACG GGGGCTCCGA GGCCACCCCC CGAGAGGACG CGGAGGAGGG GGACGACCCG GACGGGAGGG CGTGCCGGGA GCGGGCGGAC GCCGGGCCGG TGGCCGGCGT GGCGCGCTGG GTGCGGTGTT TCGCCGACGA CCCGGCGACC GCCGAGCGGC CCGTCCCCGC CGGGACCGGG GAGGCGCGTC CCGGCGGCCA GACTCCTCCC GCCCCGAACG GGAAGGACCG CCCGGGGAAC GGGAAGGACC GCCCCGGGAA GGGGAAGGGC CGTCGCGGCG TCCGGCTTGG GGCGGAGGAC GGAGAGGCGC CGGTCAGGCG GGTCGTGATC GACGATCCGC TGCGGCCGGG GGCGGTCGGG ACGCTGGTCA CGGCGGTCCG CGAGGCGATC GCGGGCGGCG AGGGGCTGGC CGTGCTCTGC GAGGGCGACG CCCTGGCCGG GTTCCTGGCG TCGCTGGGGC GGGAGCATCC CGGCCTCGGT CTCGATGCCG GGCGTCCGTC GGGAAGGGTC CCGCTCACCC TCGACGGGCA GGGGCCGCTC CCGGTGGGTC CGGGGGACGT GGTGCTGGTC AGCGGGGGCG GCGAGGGGAT CGCGGTCGCC TGTGCCATGG CGCTGGCCGA GGCGAGCGGG TGCGGGCTGG CCCTGCTCGG GCGGGGACGG CCGGGCCGCG ACGCGATCCC GGCGGGAGAC CTGGAGGAGC TGGCCCGCAG GGGCGTCCGG TACGGCTGCG CGACGGCGGA TGCCGGTGAC GCGGGGGAGG CGGCGCACGC CGTACGGGAG CTGGAGAGCG CGCTGGGGCC GGTCACCATG GTGATCCACC AGGCGGACGC CGACCGGCCG GACCGGTTCA CCGACCTCGC CGCCGAGGAC GCCGAAAGGC ACGCCGAGGA CGCCGAAAGG CACATCGTGT CCGGGCTGAC CGGCCTGGAC AACCTGCTGG CCGCGACCAC GCCCCGGCGG GTGGTGACCT TCGGATCGGT GGCCGGCCGG TACGGCCTGG CCGGCGGGAG CCACCGCGCG CTGGCCGAGG GGCTGCTGCG GGAGCGGGCC GGAAGGATCG GCGGGCTGCA CATCGACTGG CCGGTGTGGA CCGGGACCGG CCACGAACGG CGGCCGGGTG CCGCCGGAGC GGAGGTGACG GCCATCACGC CGCAGGAGGG GGTGGAGCTG TTCCTCACGC TGCTCAGGAC CGGGAACCTG CCGCCCAGCG TGGCCGTCCA CGGCAGGCTG GGCGGACCCG CCGCCCCCTG CCCGGCGGGA GGGCGGTTCC TCGACGAGGT CCGCGTGCAC GTCCCCGGCG TGGAGCTGGT CGCCGACAGC CGCCTGTCGC TCAGCAGCGA CTCCTACCTG GACGACCACC GGATCGACGG CCTGGCGGTA CTGCCCGCGG TGGTGGCGCT GGAGGCGATG GCGCAGGCCG CCGGAGTGCT GGCGGGGCGG CCGCTGGACG AGGCCGGGCA GATGACGTTC GACCGGCCGG TGGCCGTGCC CGACGAGGGC GGCACCACGA TCCGGGTATG CGCGCTCCGG CACGGGCAGA CGGTCGAGGT GGTGGTCCGC AGCGAGGAGA CGGAATTCCG CGTCGACCAT TTCAGGGCCG TGTTCCCGGT GGACCCGGCC GACGAGACGC TGGCCGTACC GCAGCTGAAC CGGGACGGCG CCGAGCCGCT GGACGCCGGG GAGCTGTACG GCGCGCTGTG CTTCCACACC GGCCGGTTCC AGCGGGTCAG GGAGCTGACC CTCGTCGAGG CGCGGGGATG CCGGGGCGAG TTGCACGGCG ACGACCCCGA CGGCTGGTTC GAGGACAGGC CGGTGCTGGG CAGCCCGGGG CTGAGCGACG CCACGATCCA CGCGCTGCAG GCGTGCGTGC CGCACCGGCG GCTGCTGCCG GTCGGCGGCG AGCGGCTGGT GGTCCGCCCG TCACAGGGGG ACGTGAGGCT GCACGCCACC GAGCGGCACC ACGACGGGGG CGAGTACGTC TGGGACGTCA CCGCCACCGA CGTGCGCGGG CGGCTGGTGG CGGCGTGGAC CGGGCTGCGG ATGAAGGACG TCGGCCCGCT CCCCCGGCGT GACCCGTGGC CGCCGAACCT GCTGGCCGTC TACCTGCAGC GGGCCGCGGT CGCCCTCGGC CTCGATCCGG CGCTGCACGT GACCATGGAC GGCGGGACGT CCCACAGCCG GCTGGGCGAC CTCGTGCTCG GCGTGGACGG CCCGGCCCAC TGCTCCTGGG AACGGGTGGG CCGGGCGCGG GGAACGCTGG GACCGGCCTC CGTCTCGCTG ATCGACGAGC TGCGGCCGTG CTGCGACGAG CCCGAGGAGA CCGTGACCAC CCGGATCTGG ACCGCTCTCC AATGCCTGTC CGGAGCGGGC CGCCCGCCGA CGACGCCGCT CACCGTCGTG GACGGCCATG AGGGTGGCTG GCTGCTGCTG CGGGCCGGCG CCGACCTGAT CGCCTCGACG GTGGTCCGGG TCAGGGGCGT GGAGGAGCCG GTCGCGGTCT CGATCATGAC CGGGGAACGG CGGTGA
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Protein sequence | MSVAIVGLAC TYPDAPDPGA LWEAVVSRRR AFRRLPVERL DLADHHSPDR SAPDRTHSTR AALIEGWEFD RAAFGVPDPV HRVTDPAHWL ALDTASRALA DAGSPGGEGL DRDRVAVVVG DTLTGEVART SALRLRWPYV RRVLSSALAE LPEETTARLL AQAEAEYLRP LPEISGESLA GTVAARICNH FDLRGGGYTV NGGCASSLLA VITACRSLLD GSVDFALAGG VDLGLDPFEL VGLAKAGALA GERMRIYDTR SDGFWPGEGC GIVALARTAD ARAAGLRIHA EITGWGVSCD GGDGVARPGA DARPEADGRL LALRRAYAHA RVSPAAVALF EGAGAGDDTV ELTALTRLLA DAARLSDAAR RAVTGSGAPG RAATGPGAVR GAAIGSVSAN IGHTGAAAGV AGLIKATLGI ASGVLPPTTG CGSPHPLLTA PGAPLRVLAV PEPWPAGPRH AGVSATGSGG VNAHLVLTAP VPTGGDSRPT TPEAVPGAAP RRRVTDGPSR EEPVVFAFSG EGLEAVRPVL ERVADQAARW SEAELCDLAY ALGTVPAGPS RIAIVAGSAE QLAERAALAL DWLDGAQSGL PATLPGVYLG PDAQDGTAPP SPAGVPSAEA AAALWAAMAI PDLTALYGDH PARPVDIWRD RVFISGPCPA VPYGGSEATP REDAEEGDDP DGRACRERAD AGPVAGVARW VRCFADDPAT AERPVPAGTG EARPGGQTPP APNGKDRPGN GKDRPGKGKG RRGVRLGAED GEAPVRRVVI DDPLRPGAVG TLVTAVREAI AGGEGLAVLC EGDALAGFLA SLGREHPGLG LDAGRPSGRV PLTLDGQGPL PVGPGDVVLV SGGGEGIAVA CAMALAEASG CGLALLGRGR PGRDAIPAGD LEELARRGVR YGCATADAGD AGEAAHAVRE LESALGPVTM VIHQADADRP DRFTDLAAED AERHAEDAER HIVSGLTGLD NLLAATTPRR VVTFGSVAGR YGLAGGSHRA LAEGLLRERA GRIGGLHIDW PVWTGTGHER RPGAAGAEVT AITPQEGVEL FLTLLRTGNL PPSVAVHGRL GGPAAPCPAG GRFLDEVRVH VPGVELVADS RLSLSSDSYL DDHRIDGLAV LPAVVALEAM AQAAGVLAGR PLDEAGQMTF DRPVAVPDEG GTTIRVCALR HGQTVEVVVR SEETEFRVDH FRAVFPVDPA DETLAVPQLN RDGAEPLDAG ELYGALCFHT GRFQRVRELT LVEARGCRGE LHGDDPDGWF EDRPVLGSPG LSDATIHALQ ACVPHRRLLP VGGERLVVRP SQGDVRLHAT ERHHDGGEYV WDVTATDVRG RLVAAWTGLR MKDVGPLPRR DPWPPNLLAV YLQRAAVALG LDPALHVTMD GGTSHSRLGD LVLGVDGPAH CSWERVGRAR GTLGPASVSL IDELRPCCDE PEETVTTRIW TALQCLSGAG RPPTTPLTVV DGHEGGWLLL RAGADLIAST VVRVRGVEEP VAVSIMTGER R
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